Gene Mnod_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3179 
Symbol 
ID7305401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3286729 
End bp3288843 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content72% 
IMG OID643600866 
Productalpha-L-arabinofuranosidase-like protein 
Protein accessionYP_002498411 
Protein GI220923109 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3534] Alpha-L-arabinofuranosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.784382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCGCA ACCGAATCCT CGCGGCCGGC GGCGCCCTGT GCGCCGCGCT GCTCGGTCTC 
GTTCTCGTCG CCGCGCAGCC GGCACCGGGC CCACACCTCG CCAATGCCGG CTTCGAACAG
GCCGGATCGC CGCCCCCCGG CTGGACCCTG GACATTCAGG CCGCCGACAA GGGCAGCGTC
CGGCAGATCA GGGTCGCGGG CGCGGAGGGC CACGCGCTCG CCCTGTCTCC GAACGCCCGC
AATCGTGGCG GCGACAAGCC GCTCGGGCTT GGCCAAGTCA TCTCGGCAAC GGAATTCGGC
GGCCGGCCGA TCACCCTGCG GGCCCGCCTC GGCGCCGAGG GCGGCGCGGC CGCGGTCCTC
GGCGTCGCGT TCCTCGACCA GAGCGGTGCC GCCATCGGCG CACCCCTCAT TCTGCGCGCC
GCCGCCCCGC CGCCGCTGGC CGTGCAATCT CTGCGCTCCG GCGAGCCCGT ACCGGCGACG
GCCCAGCAGG CGATCGTGTT CCTTGTCGCC GAGGGCCAGA CCGGGACCGC CTACTTCGAT
GAGATCGTGC TCGTGCCCGA GGTGACCGCG GCGCCGTCGG ACACCCGCAG CCAACCCTTC
GCCGCCCGGG TCTCGCTCGT TCCGGGCGAG GATCTCGGTC CCGTGCGCCG AGATCTGTTC
GGAACCAACG TCGAGTGGAT CCGCAATGCG CAGGGGCTGT GGAACACCGC GACCGGATCG
CTCGACGCGG ACATGCTGGC GCTCGCCAAG GCGGCGGGCG TCAGCGTTCT GCGCTTTCCG
GGGGGAGGCT GGTCGGACAG CTATGACTGG CGCAACGGTG TCGGCCCCCA GGCGACCCGG
CCGCGGGCCC GGCACGCCCC GGGTGAGCCG GAGGAATCGC CGAACGTTGT CGGCACCGAC
GAGATCATCG AGGCCGCACG GCGGATCGGT GCGGACCTGC TGATCACCTT GAACCTCGGC
AGCGGCACGC CCGAGCTCGC GGCCGAGTGG GCGCGCTACA TCCGTGCGCG CGTGAGCGCC
GATTCCCGGC CGCACATCAC CTGGGAGCTC GGCAACGAGC TCTACATGGA GGAGGACATC
TCACGCGCAC AGACCGACCC GCAGACCTAC GTGAAGCGCG CGCGCGCGAC CATTGCGGCC
GTGCGTGCGG TCGATCCTGC GGCGCGCTTC TATGCCATCG GCCTGGAGAA CTTCGGGCGC
TATCGCTTCA ACGCCCATCC GGGCTGGAAC GACACGGTCC TGACCTCGCT CGCCGGGGAG
ATCGACGGGC TCGCGATCCA CAACGGCTAC GCGCCCCTGC TGCCGGGCCC GGGGGGAGGC
AACGCCGCGT CCGTCTACAG GGCCATGCTG GCAGCGCCGG CCAACATGGC CGCGAACCTC
GTCACGACGA TGCGTCAGCT GCAGGCCGCA CAGACCGGGC GCCGGCTCAC GCTGGCCGTC
ACGGAATGGG GACCGCTCTT CGCCGTCGAC CCGGCCAATC GGTATTTCGA CCACGTCAAG
ACCCTGGGAT CCGGCCTCTA TGCGGCGCGG GTCCTCAACG TCCTGCTGCG GACGCCCGGC
GTCACGGAGG CCGAGTTCTT CAAGCTCAGC GACCTGCTGA ATGCGGGCTG GATCGGCCGC
AAGGTCGGCG GCGGCTATGC GGCAACCCCC GCCCTTGAGG TGCTGCGCCT CTATGCGACC
AACCTGGCGG GACGCCTGAT CGGCACGCGC GTGGATGGCC CGACCTTTTC CGGCGGCCCG
ATCGGCTTCG TCGACCGGGT CGAGGCCGCC CCGACGGTCG ACGCGGTGGC GTCACTCACG
GAGGCGGGCG ATCTCGCGGT CCTTCTCTCG AATGCGAGCC TCGACGCGCC CGCCGAGATC
GACCTCGCGC TCGACCAGCC CCGCGCGGGA TCGGTGGAGA TCCTGACCGG TCCCTCCCCC
GACGCGAGCC GCGGCACCGG CATGATCTCG GTTCCGGGGC TATCCTTCGC CCCGACTGCG
AGTTTCGGCG CCCCCCGCCC TCATGGCCGG GACGAAATCA CCCTCGCGAC CCAACCCGTC
GCACCAGGCG CACGCCTGCA CCTCGTCCTG CCGCCCGTAT CGGTCGCGGC GCTTCGCCTG
GTGCCGGCCC GATGA
 
Protein sequence
MRRNRILAAG GALCAALLGL VLVAAQPAPG PHLANAGFEQ AGSPPPGWTL DIQAADKGSV 
RQIRVAGAEG HALALSPNAR NRGGDKPLGL GQVISATEFG GRPITLRARL GAEGGAAAVL
GVAFLDQSGA AIGAPLILRA AAPPPLAVQS LRSGEPVPAT AQQAIVFLVA EGQTGTAYFD
EIVLVPEVTA APSDTRSQPF AARVSLVPGE DLGPVRRDLF GTNVEWIRNA QGLWNTATGS
LDADMLALAK AAGVSVLRFP GGGWSDSYDW RNGVGPQATR PRARHAPGEP EESPNVVGTD
EIIEAARRIG ADLLITLNLG SGTPELAAEW ARYIRARVSA DSRPHITWEL GNELYMEEDI
SRAQTDPQTY VKRARATIAA VRAVDPAARF YAIGLENFGR YRFNAHPGWN DTVLTSLAGE
IDGLAIHNGY APLLPGPGGG NAASVYRAML AAPANMAANL VTTMRQLQAA QTGRRLTLAV
TEWGPLFAVD PANRYFDHVK TLGSGLYAAR VLNVLLRTPG VTEAEFFKLS DLLNAGWIGR
KVGGGYAATP ALEVLRLYAT NLAGRLIGTR VDGPTFSGGP IGFVDRVEAA PTVDAVASLT
EAGDLAVLLS NASLDAPAEI DLALDQPRAG SVEILTGPSP DASRGTGMIS VPGLSFAPTA
SFGAPRPHGR DEITLATQPV APGARLHLVL PPVSVAALRL VPAR