Gene Mnod_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3171 
Symbol 
ID7305306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3277464 
End bp3278603 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content65% 
IMG OID643600858 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_002498403 
Protein GI220923101 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTT CTCTCTCGAT GCCATGGTGC GCGAGCGGCG TGCCCCTCTT GCTGCCGGAC 
TTGTCCGAGC TCGAGTACGC TTACGCGGCT CAGGCGCTGA AGAGCGGGGA CATCGGGCCG
GCCGGCCCCT TTCGCGACCG CTTCGAGGCG GTCTGGGCCG CCCGGAACGG CACCGCCCAT
GCGATCACGC TTTCGTCCGG GACTGCGGCA CTGCATGTTG CTCTGGCGGC GCTTGGGATC
GGACCGGGTG ATGAGGTGAT CGTCCCGGCG ACGACCTACG TGGCGAGCGC GAATGCCGTG
CTGCACGCCG GCGGCCGCCC CGTTTTCGTC GATGTGGACC CCGGAACCTT CTGTATCGAC
CCAGCCGCCA CCGCCGCTGC GGTGACGACG CGCACCCGTG CAATCATGCC GGTTCACCTG
TTCGGACATC CCTGTCCAAT GGACGAGCTG TGGGAGATTG CAGGCACGCA GAACATCGCC
CTGGTTGCCG ATGCGGCGCA CGCGCCGCTT GCCGGATATC GCGGAAGCCC GCTCGCCGCC
GCCGCGACGG TCACCACGCA CTCCTTCTTC CAGAACAAGA TTTTCAGCTG CGGCGAGGGA
GGGGCGCTGC TCACGAACGA TCCGGACCTC ATCGTGTGTG CAACGCAATT GCGGGCCCAC
GGGCTCGGTC TCGATGGTCA ATCGGTCTAT CACCGGCTCG GTTACAATTA CCGGCTGACC
AACCTCGCCT GTGCGATCCT GTGCGCACAA GAGGAGCGGG CAGACACGAT TCTCGCGCGT
CATGCCGAGT TGAATCGATT GTATCGCCAG CGCCTCGCCG ATTATCCCTG CATTACTGTG
CAGGAGGTCC GCGATTGGGC GCAGCCCGTT CACTGGCTTT TCCCCGTTGT TCTTTCGAAC
GAAGCGCCGG CAATTGATCG GGTGATCGCC CGTCTGCGCG ACTGCGGCAT CGGAGCGCGT
CCATTCTTTC CCTCTCTTGA TACGATCCCG CATCTTTCGG CGTTTCATGC GGAGCGCCGA
CACCCGCTCA CGACAGCACA CCATCTCTCC GAGCGAGGGC TGCTGCTGCC ATTGCGAGCA
ACCATGAGCG ACTGCGACGT CGAGAGGGTC GTGGAGGCGC TGGTTGTGGC GGTGCGCTGA
 
Protein sequence
MTASLSMPWC ASGVPLLLPD LSELEYAYAA QALKSGDIGP AGPFRDRFEA VWAARNGTAH 
AITLSSGTAA LHVALAALGI GPGDEVIVPA TTYVASANAV LHAGGRPVFV DVDPGTFCID
PAATAAAVTT RTRAIMPVHL FGHPCPMDEL WEIAGTQNIA LVADAAHAPL AGYRGSPLAA
AATVTTHSFF QNKIFSCGEG GALLTNDPDL IVCATQLRAH GLGLDGQSVY HRLGYNYRLT
NLACAILCAQ EERADTILAR HAELNRLYRQ RLADYPCITV QEVRDWAQPV HWLFPVVLSN
EAPAIDRVIA RLRDCGIGAR PFFPSLDTIP HLSAFHAERR HPLTTAHHLS ERGLLLPLRA
TMSDCDVERV VEALVVAVR