| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3162 |
|---|
| Symbol | |
|---|
| ID | 7305297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3266409 |
|---|
| End bp | 3267602 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643600850 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002498395 |
|---|
| Protein GI | 220923093 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCG ACACGACCCT TGACGCGCAG CCGCGGGACA CGACCGCCCG CACCCCAGTC
TTTGCCATGG CCGCCGCGGC GGGCATCGCG GTCGCCAACA TCTATTACAA CCAGCCGATG
CTCGGCGCGA TCGAGCGCGA CTTGCCGGGC AGCCTCACCG GGCTGATCCC GACCGCGACG
CAGGCCGGCT ACGCGGCCGG TCTGTTCCTG CTGGTGCCGC TCGGCGACCT CGTCGAGCGC
CGCCGTCTCA TCGCCGTGCA GTTCGGCGTC CTCGCTCTCG CCCTGGTGCT GGCAGCGGGA
GCGCCGAGCG CCGGTTTGGT CGTCCTCGCG TCGCTGCTGC TCGGCGTCGC CGCCACGGTG
GCGCAGCAGA TCGTGCCGCT CGCCGCCCAT CTGGCGCCTC CGGAGCGCCG CGGCAGCGCC
GTCGGCACCG TGCTGGCGGG CATCCTCACC GGCATCCTGC TCAGCCGCAC GCTCGCCGGC
TTCGTCGCCA CGCATGCGGG CTGGCGCGAG ATGTTCTGGC TCGGCGTGCC GCTCGCCCTC
ACAGCGGGTG GGCTGATGGC GATGCTGCTG CCGCACAGCC GGCCCGACGC GACGCTGTCC
TACGGCACGC TGATGCGCTC GATCGGTCAC CTCTGGCGCG ATCTTCCGGC CCTGCGCCTC
GCCGCCGCGA CCCAGGCGCT GATCTTCGCC GCCTTCTCGG CATTCTGGAC GATCCTGGCC
CTCCGGCTCG AGGCTCCACC GTTCGGCCTC GGCCCCGACG CGGCGGGCCT GTTCGGCGTC
ATCGGCGCGG TCGGCATCCT GGCGGCGCCG CTGGCCGGGC GCGTCGCCGA CCGGCACGGG
CCGCGGCGGA TCGTGATGCT GGGGGCGCTC GCCACGCTCC TGTCCTGGCT GATCCTCGGC
CTCTGGGCCT CCGTGATCGG GCTGGTGGCT GGCATCGTGG TGCTCGATCT TGCCATGCAG
AGCGCCTTGG TGTCGAATCA GCACTTCGTC TTCGCTCTGC GGCCCGAGGC GCGGGCGCGG
CTCAACACGA TCCTGATGGG GGCGATGTTC GTCGGCGGGA CGCTCGGATC CGCCGCATCC
ACTGCGGCCT GGAGCCGAGG CGGCTGGCTC GCCGTGTCTC TCCTCGGCAT CGGCTTCGGA
GCCGCCGCCA CGGTGCTGCA GATCGCCGGC CGGCTCGACG GGCCCCGCCA GTAA
|
|---|
| Protein sequence | MMIDTTLDAQ PRDTTARTPV FAMAAAAGIA VANIYYNQPM LGAIERDLPG SLTGLIPTAT
QAGYAAGLFL LVPLGDLVER RRLIAVQFGV LALALVLAAG APSAGLVVLA SLLLGVAATV
AQQIVPLAAH LAPPERRGSA VGTVLAGILT GILLSRTLAG FVATHAGWRE MFWLGVPLAL
TAGGLMAMLL PHSRPDATLS YGTLMRSIGH LWRDLPALRL AAATQALIFA AFSAFWTILA
LRLEAPPFGL GPDAAGLFGV IGAVGILAAP LAGRVADRHG PRRIVMLGAL ATLLSWLILG
LWASVIGLVA GIVVLDLAMQ SALVSNQHFV FALRPEARAR LNTILMGAMF VGGTLGSAAS
TAAWSRGGWL AVSLLGIGFG AAATVLQIAG RLDGPRQ
|
|---|
| |