Gene Mnod_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3147 
Symbol 
ID7305282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3252226 
End bp3253695 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content66% 
IMG OID643600835 
Productshort chain fatty acid transporter 
Protein accessionYP_002498380 
Protein GI220923078 
COG category[I] Lipid transport and metabolism 
COG ID[COG2031] Short chain fatty acids transporter 
TIGRFAM ID[TIGR00366] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACGC TGCCGGGCGA TGCCAGCCGA TCCTCAGACA TTCAATCGGT CGACCGAAAA 
GCCGATGCCA CAGGTGCCCT CGCACGGCTC GGCATTCGCT TCACCGCCTG GGCCGAGCGC
TGGTTCCCAG ACGCCTTCAT CTTCGTCGCG ATCGCGGTGG TAATCGTGGC GCTCGGCGCC
CTGGCGAACG GGGCCCCGGT TTCTTCCGTC GCCAAGACCT TCGGGGACGG CTTCTGGAGC
CTCATCCCGT TCACGATGCA GATGGCCTTC GTGACGATCG GCGGCTATGT CGTCGCCACC
TCGCCACCGG TCCAAGCGTT GATCGACCGC CTCGCCAGGA TCCCGCGGAC GGGGCGCGGG
GCGGTGGGCC TCGTGGCCAC GGCGACCATG CTCTCGTCCT TCCTCAGCTG GGGCCTCAGC
CTCATCTTCG GCGGCCTGCT CGCTCGGGCG CTGGCCCGCC GGCCGGAGCT GAGCATGGAC
TACCGGGCCG CCGGGGCCGC GGCCTATCTC GGCCTGGGTG CGACCTGGGC GATGGGCCTG
AGTTCCTCGG CTGCCCAGCT CCAGGCCAAT CCGAAAAGCC TGCCGCCGAA CCTTTTGCCG
ATCACCGGGG TGATCCCCTT CAGCGAGACG ATCTTCCTCT GGCAGTCCCT TCTGGTGGCC
ACAATCCTGT TCGTGATCTC GGTCATGATC GCCTACGCGT CGGCCCCAAC GCCTGTCAGC
GCCGTCACCG CGCAGGATCT CGGCGTGGAC GTCTCGGCCA AGCAGGAGAG ACTCGATCCG
CCAGCTCAGC CCGGAGAGAA GCTGGAGCAT TGGCCGCTCC TGAACATCCT CCTTGTCATC
ATTGCCGGCG GCTGGATCTG GCAGGAATTC GCGCGGCAAT CGTGGATTGT CGCGATCTCG
AACCTGAACA CCTACAATCT GCTGTTCCTG ACCCTCGGCC TGCTGCTTCA CTGGCGCCCG
AAGCGGTTCC TGATCGCCGT TGCGAAAGCG GTCCCGGCGA CCGCCGGGGT TCTGATCCAG
TTCCCCCTCT ACGCCTCGAT CAGCGCGATC CTCACGGGGG CTAAGAACGC CTCGGGCCAA
ACGCTGTCGG AGGTGATCAG CCACGCCTTC GTCAGCTTCA ACACAACAGG CAGCTTCCCG
CTCTCGATGG GCGGCTACTC GGCGGTGCTC GGCTTCTTTG TACCCTCGGG CGGCGGCAAG
TGGCTGCTGG AGGCGCCCTA CGTGATGCAG GCCGCCAACG AGTTGAAGGT GCATCTCGGC
TGGGCCGTGA TGATCTACAA CGCGGCCGAG GCGCTGCCGA ACCTGATCAA CCCGTTCTGG
ATGCTGCCGC TGCTCGGCAT CCTCGGGCTC AAGGCCCGCG ACATCGTCGG CTTCAGCTTC
CTGCAGCTTC TCGTCCACCT GCCGGTGGTG CTGTTCCTGC TCTGGGCACT CGCATTCACG
CTGACCTACC ACCCGCCAGT GATGCCCTGA
 
Protein sequence
MPTLPGDASR SSDIQSVDRK ADATGALARL GIRFTAWAER WFPDAFIFVA IAVVIVALGA 
LANGAPVSSV AKTFGDGFWS LIPFTMQMAF VTIGGYVVAT SPPVQALIDR LARIPRTGRG
AVGLVATATM LSSFLSWGLS LIFGGLLARA LARRPELSMD YRAAGAAAYL GLGATWAMGL
SSSAAQLQAN PKSLPPNLLP ITGVIPFSET IFLWQSLLVA TILFVISVMI AYASAPTPVS
AVTAQDLGVD VSAKQERLDP PAQPGEKLEH WPLLNILLVI IAGGWIWQEF ARQSWIVAIS
NLNTYNLLFL TLGLLLHWRP KRFLIAVAKA VPATAGVLIQ FPLYASISAI LTGAKNASGQ
TLSEVISHAF VSFNTTGSFP LSMGGYSAVL GFFVPSGGGK WLLEAPYVMQ AANELKVHLG
WAVMIYNAAE ALPNLINPFW MLPLLGILGL KARDIVGFSF LQLLVHLPVV LFLLWALAFT
LTYHPPVMP