| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3138 |
|---|
| Symbol | |
|---|
| ID | 7305273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3243078 |
|---|
| End bp | 3244241 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643600827 |
|---|
| Product | protein of unknown function DUF1624 |
|---|
| Protein accession | YP_002498372 |
|---|
| Protein GI | 220923070 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3503] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCCT CGGACACCAC ACCCCTGGCG GGCGAACGCA GCCGCATCGG CTCGATCGAT
GCTCTGCGCG GCCTCGTGAT GCTGCTGATG CTCGTCGACC ACGTGCGGGA GTTCTTCTAC
CTGCACGCTC AGGTCCGCGA CCCGGTCGAC CTGTCCGTCA CGCCGCCGGA CCTGTTCCTG
ACCCGGGCCG CCTCGCACCT CTGCGCGCCG GTCTTCATCC TTCTGACCGG CCTGTCGGCG
AGCCTCTACG CGGCGAAGCA CGACAGCCCT CGCGCGGCCT CCGCCTTCCT CTTGAAGCGC
GGGATCCTCC TCGTCCTGCT GGAGGTGACG CTAGTGAACC TCGCCTGGAC GCGCAACCTG
CTGCCGCCGG TCCTCTACCT GCAGGTGATC TGGGCGATCG GCCTCAGCAT GGTGGCGCTC
GCCGGCATCC TATGGCTGCC GCGGGCCGTG CTCCTTGCCG TCTCTCTCGC ACTCATGCTG
GGGCACAACC TGCTCGACGC GGTCGTTCTC ACCCCGGACC AGCCGGGCTT CGCCCTGTGG
TCGATCCTGC ATCAGCGCGG GCTCGTCCCG CTGCCCTGGG GCGCGGCGCG CACCTCCTAC
CCGGTGCTGC CCTGGATCGG CGTCATCGGT GCAGGCTATG CCCTGGGACC ACTCTTCGCA
CGCGCCCTGC CGACCGGAGG TCGCCGTTGG CGGCTCCTCG CCCTCGGAGG GAGCGCGCTG
GCCGCCTTCC TGGTGCTGCG CGGTCTCAAC GGCTACGGCG ATCCCGTCCC CTGGCAGCCG
GGCGCGACCG CGTTCGCGAC GGCTTTGTCC TTCGTCAATC TCACGAAGTA TCCGCCCTCG
GCCGACTTCC TGCTCCTGAC GCTCGGCGTG GGGCTCCTGC TGCTGGCCGT GTTCGAGGTG
CTGCCCGCGG CCGGTCTGGG CTGGCTGCGC ACCTTCGGTG GCGCGCCGCT GTTCTTCTAC
CTCCTGCATC TTTTCCTGTT GCGGCTGATC CACGATGGAG CGGCGGGCCT GGGCCTCGCC
GGAGCCTCGG GCCGGATGGA GGCCGGCTCG CCCATGCAGG TCTGGCTGAT CGCGGCCGGG
CTCAGTCTCC CGCTGTTCGT GGCCTGCCGC TGGATGGTGC AGCTCAAGCG CCGCGCCGTG
TGGCCGGGTC TGAGCTATCT CTGA
|
|---|
| Protein sequence | MRSSDTTPLA GERSRIGSID ALRGLVMLLM LVDHVREFFY LHAQVRDPVD LSVTPPDLFL
TRAASHLCAP VFILLTGLSA SLYAAKHDSP RAASAFLLKR GILLVLLEVT LVNLAWTRNL
LPPVLYLQVI WAIGLSMVAL AGILWLPRAV LLAVSLALML GHNLLDAVVL TPDQPGFALW
SILHQRGLVP LPWGAARTSY PVLPWIGVIG AGYALGPLFA RALPTGGRRW RLLALGGSAL
AAFLVLRGLN GYGDPVPWQP GATAFATALS FVNLTKYPPS ADFLLLTLGV GLLLLAVFEV
LPAAGLGWLR TFGGAPLFFY LLHLFLLRLI HDGAAGLGLA GASGRMEAGS PMQVWLIAAG
LSLPLFVACR WMVQLKRRAV WPGLSYL
|
|---|
| |