Gene Mnod_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3125 
Symbol 
ID7305260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3224749 
End bp3225930 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID643600814 
Productalanine racemase domain protein 
Protein accessionYP_002498359 
Protein GI220923057 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.682983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTGG CCCAGCCCAA TGCCAAACCG CCGACCCCCC GATCCTGTCC AGCGCTGGAT 
GCCCTGCAGA CCCCCTGTCT GCTCCTCGAT GAGGTGCGGC TTCGGGCCAA CGTCGAGCGG
ATGCGCGCAC ATCTCACGCG CCTCGGCGTC GCCTTCCGCC CGCACCTCAA GACCGCGAAG
TCGCTTGACG TCGCGCGCAT CGCAATGACG GCCCCCGAGG GGCCCGCCAT GGTCTCGACG
CTGCGCGAGG CGGAGTACTT CGCCAGGGGC GGCGTGCGCG ACATGATCTA TGGGGTCGGC
ATCGCACCCG CGAAGCTCGC GCGCGTCTCG GCCATCCGGG CGGGCGGCGC CGACCTCACG
GTGATCCTCG ACAGTCTGGA GCAGGCCGAG GCGGTCGCCG ACCACTCCAG CAGCAGCAGC
GACCCCCTGC CTGTCCTGAT CGAGGTCGAT GCCGACGGTC ACCGCTCCGG CGTCGCACCG
GGCGACGCTG ATACCCTGTT GGCGATCGGC CGGCTCCTGC TGGCGGGTGG CGTTTCCTTG
CGCGGCGTTC TGCTCCATGC AGGCGACAGC TACGCCCTCA GCGACCCCGA GGCCCTCGCG
GCCGCGGCGG AAGCGGAGCG CCGGGCGGCC GTCACCGCGG CCGAGACCCT GCGGGCGGCG
GGTCTGCCCT GTCCCATGGT CAGCGTCGGC TCGACCCCGA CCGCGCGCTA CGCCCGAAAC
CTCGTCGGCG TCACCGAGGT ACGGGCCGGC GTCTTCATGT TCGGCGACCT GTTCCAGGCG
GGCGTCGGTG CGGTGGCGAT GGAGGATATC GCGCTCTCCG TGCTCGCCAC CGTGATCGGG
CACCAGCGCG CCAAGGGCTG GATCATCACG GATGCCGGCT GGATGGCGCT CTCGCGGGAT
CGGGGCACGG CGCGCCAGAA GGTGGATCAG GGTTATGGCG TGGTCTGCAA CCTTGCGGGG
CAACCGTACC CGGATCTGAT CGTGGCGGAC ACCAACCAGG AGCATGGCAT CGTAGCCCTG
CGCCGTGGCT CGGACGCCGC CCTGCCCGAC CTGCCTGTCG GCGCGCGCGT GCGGATCCTG
CCGAACCATG CCTGCGCCAC CGGTGCGCAG CACGACTGCT ACTACGTCCT CGACGGCAGC
GGGCGCGTCG GTGCGGTCTG GCCCCGAATC AACGGCTGGT AG
 
Protein sequence
MLVAQPNAKP PTPRSCPALD ALQTPCLLLD EVRLRANVER MRAHLTRLGV AFRPHLKTAK 
SLDVARIAMT APEGPAMVST LREAEYFARG GVRDMIYGVG IAPAKLARVS AIRAGGADLT
VILDSLEQAE AVADHSSSSS DPLPVLIEVD ADGHRSGVAP GDADTLLAIG RLLLAGGVSL
RGVLLHAGDS YALSDPEALA AAAEAERRAA VTAAETLRAA GLPCPMVSVG STPTARYARN
LVGVTEVRAG VFMFGDLFQA GVGAVAMEDI ALSVLATVIG HQRAKGWIIT DAGWMALSRD
RGTARQKVDQ GYGVVCNLAG QPYPDLIVAD TNQEHGIVAL RRGSDAALPD LPVGARVRIL
PNHACATGAQ HDCYYVLDGS GRVGAVWPRI NGW