Gene Mnod_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3088 
Symbol 
ID7304015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3188997 
End bp3189788 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID643600785 
Producthydroxypyruvate isomerase 
Protein accessionYP_002498330 
Protein GI220923028 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.645228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGGT TCAGTGCAAA TCTTTCAATG CTGTTTCCGG AAGTGCCCTT CCTCGACCGG 
TTTGCGGCAG CAAAAAACGC CGGCTTCGAG GGAGTAGAGT ACATGTTCCC CTATGCCTAT
CCGAAACGGG ATCTGGCCGA TCGGCTCAAG GCCCTGGGCC TCCAGCAGAT CCTGTTCAAT
CTTCCGGCGG GGGATTGGGA CAAGGGCGAG CGTGGGATCG CCTGTCATCC GGCCCGTGTC
GGCGAGTTTC GCACCGGCGT CGGCGAGGCG ATCGAATACG CCAAGGCCCT CGGCTGTCCG
CAGGTGAATT GCCTGGTCGG CTTGGCTGCA TCCGATGTCG ATGCGCAGGT TCAACGCGAG
ACACTGGTCA GCAACTTGCG GTTTGCTGCC GAGACGCTCA AGAGCGAGGG GATTATTCTC
CTTATCGAAC CGGTCAACAC GTATGACATT CCGGGATTCT ATCTGAATCT GTCGGATCAG
GCGATCAGGA TCATCGGTGA CGTTGGGTCG GAAAACCTGA AACTGCAGTA CGACATCTAT
CATATGCAGC GGATGGAGGG AGAGCTCGCC AACACCCTGG CCAAGCTGCT GCCGCACATC
GCCCATGTTC AGGTTGCCGA CAACCCCGGT CGCCATGAGC CCGGCACCGG AGAGATCAAC
TACCCGTTCC TTTTCGAGCA TCTCGATCGG CTCGGATACG CCGGTTGGGT CGGGTGTGAA
TACAAGCCGC GCGGAGAGAC GCAGGCCGGA CTGGCCTGGC TGTCGAGGAG CGCGCGTCCA
GTCGAAGCAT AG
 
Protein sequence
MPRFSANLSM LFPEVPFLDR FAAAKNAGFE GVEYMFPYAY PKRDLADRLK ALGLQQILFN 
LPAGDWDKGE RGIACHPARV GEFRTGVGEA IEYAKALGCP QVNCLVGLAA SDVDAQVQRE
TLVSNLRFAA ETLKSEGIIL LIEPVNTYDI PGFYLNLSDQ AIRIIGDVGS ENLKLQYDIY
HMQRMEGELA NTLAKLLPHI AHVQVADNPG RHEPGTGEIN YPFLFEHLDR LGYAGWVGCE
YKPRGETQAG LAWLSRSARP VEA