Gene Mnod_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_3087 
Symbol 
ID7304014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3187209 
End bp3188984 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content63% 
IMG OID643600784 
Productglyoxylate carboligase 
Protein accessionYP_002498329 
Protein GI220923027 
COG category[R] General function prediction only 
COG ID[COG3960] Glyoxylate carboligase 
TIGRFAM ID[TIGR01504] glyoxylate carboligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGA TGACAGCGGT GGCTGCAGCC GTGCAGGTGA TGGAGCGTGA AGGGATCTCG 
GTTGCCTTCG GCATTCCGGG GGCAGCCATC AATCCCCTCT ATGCAGCCTT GCGCGGCCGC
AATCGCATTC AGCACTTCCT CGCTCGCCAT GTGGAGGGCG CCTCGCACAT GGCCGAAGGC
TACACGCGGG CGAAAGCCGG CAACATCGGC GTGTGCATCG GCACTTCGGG ACCGGCCGGT
ACGGACATGA TCACCGGTCT TTATTCTGCC TGGGCTGATT CAATTCCGAT CCTCTGCATA
ACCGGTCAGG CCCCGCTTGC CCGACTGCAT AAGGAAGATT TCCAGGCTGT CGACATCGAG
GCGATCGCCA AGCCGGTGAC GAAATGGGCT GTCACGGTGC GCGAGCCTGC CCTGGTGCCG
CGTGTCTTCC AGCAGGCGTT TCACCTCATG CGCTCGGGCC GGCCGGGGCC TGTTCTCATC
GATCTGCCCT TCGACGTGCA GATGGGCGAA ATCGAGTTCG ACATCGAAAC CTACGAGCCC
CTGCCGATCT ACAAGCCCCA GGCGACGCGG GCTCAGATCG AGAAAGCGCT GTCCATGCTC
GACGAGGCCG AGCGCCCGCT GATCGTCGCG GGCGGCGGGA TCGTCAATGC GGATGCCTCC
GCTTTGCTCG TGGACTTCGC GGAGATCACC GGCGTCCCGG TGATTCCCAC GCTCATGGGA
TGGGGCTCCA TCCCCGACGA TCATAAGCTC ATGGTCGGCA TGGCGGGGCT TCAGACCAGT
CATCGCTATG GCAATGCATC ACTGCTTGCC TCCGACTTCG TGCTCGGCAT CGGCAACCGG
TGGGCGAACC GCCATACCGG AAGCCTCGGC GTCTACACGG CGGGACGTCG CTTCGTGCAT
GTCGACATCG AACCGACTCA GATCGGGCGC GTCTTCATGC CTGATTACGG CATCGTCTCG
GACGCCAAGG CAGCCCTTGA GCTGTTTGTC GAAGCGGCGC GGGAAAGGGC GCGCAGCGGC
AAGCTTCGCG ATCGGTCCGC CTGGGCCGAA GAATGCGCTG GGCGCAAGCG AACGATGTTG
CGCCGCACGC ATTTCGAGGA TCGGCCGATC AAGCCGCAAC GCGTCTATGA GGAAATGAAC
AAGGCGTTCG GCCGCGACAC GACCTATGTC AGCACGATCG GCCTCTCTCA GATCGCCGCC
GCCCAGCTCC TGCATGTCTA CAAGCCCCGC GGCTGGATCA ATTGCGGTCA AGCCGGTCCC
CTGGGTTGGA CCGTTCCGGC TGCACTGGGG GTACGAGCGG CAGATCCCGA CTCGCTGGTG
GTCGCCATCT CCGGAGATTA CGATTTTCAG TTCCTCATCG AGGAACTGGC GGTCGGCGCG
CAGTTCCGCC TGCCTTACGT TCATGTCGTC GTCAACAACT CCTATCTCGG GCTCATCCGT
CAGTCTCAGC GCGGCTTCGA CATGGACTAC TGCGTGCAGT TGTCCTTCGA GAACCAGAAC
GCGCCGGAAC TCGGCGCCTA TGGCGTCGAC CACGTGAGGG TTGTCGAGGG TCTCGGCTGC
AAGGCCATCC GCGTAACGGA TCCTGAATTG CTGCTTCCGG CTCTCGAGGA AGCGAAAAGC
CTCGCGAAGC AGGTTCAGAC GCCGGTCATG GTCGAGGTCA TCCTGGAACG GGTCACGAAC
GTCGCGATGG GAGTGGACAT CGACAAGGTG ACCGAATTCG AGGACCTCGC CCTGTCCGCG
GAAGACGCAC CCACCGCAAT CGCCCTCCTG GACTGA
 
Protein sequence
MPKMTAVAAA VQVMEREGIS VAFGIPGAAI NPLYAALRGR NRIQHFLARH VEGASHMAEG 
YTRAKAGNIG VCIGTSGPAG TDMITGLYSA WADSIPILCI TGQAPLARLH KEDFQAVDIE
AIAKPVTKWA VTVREPALVP RVFQQAFHLM RSGRPGPVLI DLPFDVQMGE IEFDIETYEP
LPIYKPQATR AQIEKALSML DEAERPLIVA GGGIVNADAS ALLVDFAEIT GVPVIPTLMG
WGSIPDDHKL MVGMAGLQTS HRYGNASLLA SDFVLGIGNR WANRHTGSLG VYTAGRRFVH
VDIEPTQIGR VFMPDYGIVS DAKAALELFV EAARERARSG KLRDRSAWAE ECAGRKRTML
RRTHFEDRPI KPQRVYEEMN KAFGRDTTYV STIGLSQIAA AQLLHVYKPR GWINCGQAGP
LGWTVPAALG VRAADPDSLV VAISGDYDFQ FLIEELAVGA QFRLPYVHVV VNNSYLGLIR
QSQRGFDMDY CVQLSFENQN APELGAYGVD HVRVVEGLGC KAIRVTDPEL LLPALEEAKS
LAKQVQTPVM VEVILERVTN VAMGVDIDKV TEFEDLALSA EDAPTAIALL D