Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_3079 |
Symbol | |
ID | 7304006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 3178584 |
End bp | 3179603 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643600778 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_002498323 |
Protein GI | 220923021 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCTGT CCCGTCGTCG TCTGCTGGCC TTCGGCTCCT CGGCCGTTGT GGGCAGCCTG ATCGGGGCGC CGCGGATCGT CCGCGCCCAG GCCGCCGAAT TCACCTACAA GTACGCCAAC AATCTGCCCG ATACGCACCC CATGAACGTG CGTGCCCGTG AGATGGCGGC GGCCATCAAG GCGGAAACCA ACGGCCGCTT CGATCTGCAG ATCTTTCCGT CGAGCCAGCT CGGCTCTGAC ACCGACACCT TGAGCCAGCT CCGGGCTGGT GGCGTCGAGT TCTTCACACT GTCACCGCTG ATCCTGTCGA TCCTGGTTCC CGCCGCCTCG ATCAGCGGGA TGGGGTTCGC CTTCCCGGAC TACGACGCGG TCTGGAAAGC GATGGATGGC GACCTCGGCG CGCATGTCCG GCAGCAGATT GCCAAGTCCG GGCTCTTCGC CATGGAGAAA ATCTGGGACA ACGGCTTCCG TCAGACGACC TCATCGTCCC GCCAAATCAA TACACCCGAC GATCTGCGCG GTTTCAAGAT CCGGGTTCCC CCTTCGCCGT TGTGGACGTC GATGTACAAG GCGTTCGAGG CTGCTCCGAC GTCGATCAAT TTCAACGAAG TTTATTCGTC GTTGCAAACA AAGATCGTTG ACGGCCAAGA GAATCCGTTG GCGATCATTG CTACCGCGAA ACTGAATGAG GTGCAGAAGT ACTGCTCTCT GACGAACCAC ATGTGGGACG GGTTCTGGTT CCTGGCGAAC CGGCGAGCCT GGGAACGGCT GCCGAAGGAT GTGCAGACCG TCGTTGCCAA GCACATCAAC GAAGCCGGCC AGAAAGAGCG CGAAGACGTT GCTCAACTTA ACGCCAAGCT CCAGCAGGAA CTGACTGCCA AAGGCTTGGT CTTCAACAGT CCAGATCAGG CTCCTTTCAG AGACAAGCTG CGCAAGGCTG GGTTCTACGC CGAGTGGAAG GGTCGCTACG GACAGGAGGC CTGGACAATC CTCGAGAAGA CGACCGGAAA GCTGGTATGA
|
Protein sequence | MHLSRRRLLA FGSSAVVGSL IGAPRIVRAQ AAEFTYKYAN NLPDTHPMNV RAREMAAAIK AETNGRFDLQ IFPSSQLGSD TDTLSQLRAG GVEFFTLSPL ILSILVPAAS ISGMGFAFPD YDAVWKAMDG DLGAHVRQQI AKSGLFAMEK IWDNGFRQTT SSSRQINTPD DLRGFKIRVP PSPLWTSMYK AFEAAPTSIN FNEVYSSLQT KIVDGQENPL AIIATAKLNE VQKYCSLTNH MWDGFWFLAN RRAWERLPKD VQTVVAKHIN EAGQKEREDV AQLNAKLQQE LTAKGLVFNS PDQAPFRDKL RKAGFYAEWK GRYGQEAWTI LEKTTGKLV
|
| |