| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3026 |
|---|
| Symbol | |
|---|
| ID | 7304232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3115014 |
|---|
| End bp | 3117923 |
|---|
| Gene Length | 2910 bp |
|---|
| Protein Length | 969 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643600726 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002498271 |
|---|
| Protein GI | 220922969 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCG TGCCCAACCG TCTTCGCTCC GGTTACCCCC TGCGCAATTC AGCCGGCGTG
ACGTTACTCG TCGCCTTGCT CCTGGTGCTC ATCGGCGTCT GGCAGATTAT GCGCTCGCGC
GAGGCTGCCC TCGCGGATGC GCGCAAGGAT GCGCGCAATC TCAGCCGGTC GCTTGCCCAG
CACGCCGAGC GCACGATCGA GGCCGTCGAC CTGATCCTCT CCGGCACGAC CGAGTGGATC
GAGCACAACC CCGATCGGAC GACCGTGAAA GGCTTTCTCG TCCGCTGCAC AGGGACCATC
GCGCAGGTGA GCGTGATCGC CATCACTGAT GCCAACGGCC TGTGGGTCGT CGACACGCTT
GCGCCGCACC CGCCCATCAG CAGTGCCGAC CGGCCCTACT TCGCCTGGCA TCGGGACCAT
TCGGAAGACA GCGCCGTGGT CATCGGCGCA CCAATGCGCA GCCATTACGA GCAAAGGTCA
GTTCTCCCCC TTTCGCGCCG GCTGAACAAT CCAGATGGGT CGTTCGCCGG TGTTGTCATG
GCCGCGCTCG AACCGGACTA CTTCGCGCAG TTCTACGCTA CGCTCGGCCT GGGCGAGCGA
GGTAGCATTG GGCTGTGGAG CACGGAGGGG CAGCTTCTCT CACGACAGCC GGCGGCGCCG
ATCGAGAGCC AAAGCAAGGA CTACTCCGCC ACGCCTCTCT TCCAAAACCT GCACCAAGCC
TCGTCCGGCG TCTACGATGA GCCAGCGGCC GTGGATGGGG TCGAACGCAT CGTCGCCTAC
GAGCGGCTGG TGAAGTACCC CGCGCTGACG GTCTCGGCTG CGATCGCAAG GGATGACGCA
CTCGCGCCCT GGCGCCGGGA GGCTGTGATC CAGGCCGGCG CGATCAGCAC GGTGGCGCTC
GCTCTCGTCG GGCTTGGCGT CGGTCTCGGG CGGCGGGACC GGCGCGTGCG GGCGGCCGAA
GCCGAGGCGC GCGCGAGCGC GGATCTGCTC GCCGTGACGC TGGAGAACAT GGATCAGGGC
CTGATGATGG TTGATGCCGA CGATCGGGTT CAGGTCTGCA ATCGGCGCGC CTTGGAACTC
CTGGACCTGC CTGCGGCGTT CATGGCGCAA AAACCTACCT TCACCGCGGT GCGCAATTAC
CAGCTTGCGC AGAACGAGTT CGTACGGTCC GACGATGCCT TCCGCGCCTG GGTGGCCAGG
GCGGGTCTTG AGCCGAAGGA GCACACCTAC GAGCGCGAGC GTCCGAACGG CACCGTTCTG
GAGATCCGGA CCGTGCCGCT TGCGGGAGGC GGTGCGGTGC GTACCTATAC CGACATCACC
GCCCGGCATG GCGCGGAGCA GGCCCGGCGC GAGAGCGAGG CGCGCTACAG GCTTCTCGCC
GACAACGTCT CCGACCTTAT CGTCCTTGGC CATGCCGACG GCCGTCGCTC CTACATCTCA
CCCGCGGTGC ACGCCATGCT CGGCTACACG GTCGAGGAGG CGCACCGGAT CGGTATGCGC
GAGTGGCTGC ACCCGGAGGA CTTGGGCCGG GTGTTCGCCA CAACGACGAG CCTCTCCCCG
GAGAGGCCAA CCGCCTCCGT CGTTTACCGC CTCAGGCACA AGGCGGGGCA TTACGTCTGG
GCTGAGGCCG TATTCCAACG GGTCGAGGAC GCCGGCGAGG TCACCATCAT CACCGCGATT
CGCGACGTCA CCGAGCGGGT CCGGCAGGAA CGCCGCTTGG AGCAGGCCAA GGTGGCGGCA
GAGGCCGGCG CTCGGGTCAA GGCCGAGTTC CTGGCCAACA TGAGCCACGA ACTCAGGACG
CCGCTCACCG GCATGCTTGG CGTGCACGAC CTCCTGGCCG GTGACACCTC GCTTTCGGCG
GCCCAACGGC ATCTGATCGG GTTGGCGCAG GAGGCCGGGC GTTCGCTGCT CGCCATCGTC
AACGACATCC TGGATTTCTC CAAGATCGAA GCCGGGCAGA TGGCCATCGA ACGCGTGCCA
TTCTCCCTGC GCGCGCTCGT TGAGAGCTGC CGGGAGTTGG TCGCGGAGAG CGCCAAGGGC
AAGCCGCTCC GGCTCGTCGC GGAGATCGAA GGCGACGTGC CTGATTGGTA TGTCGGCGAC
CCGACACGTT TGCGCCAGAT CCTCCTCAAC CTCGCCAGCA ACGCCGTGAA GTTCACTCCA
CAGGGTGAGA TCGCCTTGCG CGTTCGCTCC GCGGCGGGCA CAGGGCGTGT GCGGGTCGAG
GTCACGGACA CGGGCATCGG CATCCCCGCC GACAAGCTGC CCCTCCTGTT CGAGCGGTTC
AGTCAAGCCG ACACCTCGAC CACGCGTCAG TACGGCGGCA CGGGCTTGGG TCTCGTGATC
TGCAAGCGCC TCGTAGAACT CATGGGGGGC GCGATCGGTG TCGAGAGCAT ACCTGGGCAG
GGCTCGACCT TCTGGTTCGA GCTGCCGCTG GCTTCGGCAG GGGCTGATCG GCGGGGCGAG
ACCGCGTCGC AAGCCCTCAC TGCTGGCCCT GTTGCCCAGG CATACCGCAT CCTCGTCGCC
GAGGACAACG AGATCAACCA GGAGATCATT CGCATCGTGC TGAGCCGCCG CGGGCACGAC
GTGGTGCTCG TCAGCGACGG GGCGCAGGCC ATTGAAGCGG TCAAGGCAGG GCCGGCTTTC
GACATCGTGC TCATGGACGT GCAGATGCCG GTGCTCGACG GGATCAGTGC GACTGCTGCG
GTGCGGACGT GGGAGCGTGC GCAGGGCCGC CGTCCCACGC CGATCGTGGC GCTCACGGCG
AATGCCATGG ACGCGGATGT GGAGCGGTGC CGGGCAGGTG GCATGGACGC TCACGTCGGG
AAACCGATCA ACTGGACGGA ATTGTTCGGA GTCGTCGAGC GGCTGTGTTC GGCTCTGGCC
GGAAACGCTG AAGGGCGAGG CCGGAGGTGA
|
|---|
| Protein sequence | MLFVPNRLRS GYPLRNSAGV TLLVALLLVL IGVWQIMRSR EAALADARKD ARNLSRSLAQ
HAERTIEAVD LILSGTTEWI EHNPDRTTVK GFLVRCTGTI AQVSVIAITD ANGLWVVDTL
APHPPISSAD RPYFAWHRDH SEDSAVVIGA PMRSHYEQRS VLPLSRRLNN PDGSFAGVVM
AALEPDYFAQ FYATLGLGER GSIGLWSTEG QLLSRQPAAP IESQSKDYSA TPLFQNLHQA
SSGVYDEPAA VDGVERIVAY ERLVKYPALT VSAAIARDDA LAPWRREAVI QAGAISTVAL
ALVGLGVGLG RRDRRVRAAE AEARASADLL AVTLENMDQG LMMVDADDRV QVCNRRALEL
LDLPAAFMAQ KPTFTAVRNY QLAQNEFVRS DDAFRAWVAR AGLEPKEHTY ERERPNGTVL
EIRTVPLAGG GAVRTYTDIT ARHGAEQARR ESEARYRLLA DNVSDLIVLG HADGRRSYIS
PAVHAMLGYT VEEAHRIGMR EWLHPEDLGR VFATTTSLSP ERPTASVVYR LRHKAGHYVW
AEAVFQRVED AGEVTIITAI RDVTERVRQE RRLEQAKVAA EAGARVKAEF LANMSHELRT
PLTGMLGVHD LLAGDTSLSA AQRHLIGLAQ EAGRSLLAIV NDILDFSKIE AGQMAIERVP
FSLRALVESC RELVAESAKG KPLRLVAEIE GDVPDWYVGD PTRLRQILLN LASNAVKFTP
QGEIALRVRS AAGTGRVRVE VTDTGIGIPA DKLPLLFERF SQADTSTTRQ YGGTGLGLVI
CKRLVELMGG AIGVESIPGQ GSTFWFELPL ASAGADRRGE TASQALTAGP VAQAYRILVA
EDNEINQEII RIVLSRRGHD VVLVSDGAQA IEAVKAGPAF DIVLMDVQMP VLDGISATAA
VRTWERAQGR RPTPIVALTA NAMDADVERC RAGGMDAHVG KPINWTELFG VVERLCSALA
GNAEGRGRR
|
|---|
| |