| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_3015 |
|---|
| Symbol | |
|---|
| ID | 7304221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 3101741 |
|---|
| End bp | 3102895 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643600716 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002498261 |
|---|
| Protein GI | 220922959 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAC ATCGCCCTAC AAGCCGAGCC CTGCCGCTCG TCGTCCCGCT CTGGCTGACG
CTCGCCGCCT GCCAGCCGCT CTCCAGGGAT TCGTCCTCCG CTGCGTCGGT ACCCGAGGTG
TCCACCGTGG CGGCCGCAGC CGCGACGGTG CCGCTCACGC TCGACTTGCC GGGACGCCTC
GCCCCGACGC GCGTGGCCGA GGTGCGTGCC CAGGTCTCCG GCATCATTCA GGAGCGGATG
TTCGAGGAAG GCAGCCTCGT GCGCAAAGGG GATGTTCTCT TCCGCATCGA CCCGGCCGTC
TACAAGGCCG AGGTCGATGC CCGGGCGGCC GCCCTCGACC GAGCCGAGGC GACCCGCGAT
CAGGCGCTGC GCCAGTCGGA GCGCGCCGAG ACGCTTCTGG AGAGGCAGGC GACGAGCAGC
GCCCAGCACG ACATCGCCGT CGCGGCCCTG CGCCAAGCCG AGGCTGACGT GGCAAGCGCA
CGGGCTCAAC TCGCTCGCGC CCGGATCGAG CTCGATTACG CCACGGTGCG CGCGCCCATC
GGCGGACGCA TCGGGCGCGC CCTCGCGACC GAGGGCGCCC TGGTCAGCCA GAACGACGCC
ACGCGCCTCG CCGTGATCCA GCAGATCGAT CCGATCTATG CCGACTTCAT GCAATCCGCA
TCCGACCCGA GCCCGCTCAC CGAACGAGCT GCCGGCAAGG AGGCAACAGA AGTGCGACTG
GTCGATTCCG ACGGTACCCC GTACGCGGAT ACGGGCCAGC TGCTCTTTAC GGATGCCAGC
GTCGATCCTG GCACCGGGCA GGTCAGTCTA CGGGCGACGT TCCCCAACCC GCGAGCCGCT
CTGCTGCCGG GCACATACGT GCGCGTGCGC GTCGCCCAGG GCGTGAAGGC CGATGCTACT
ATTGTACCGG CGCAGGCGAT CCAGCGTAGC AGTGCCGGCG AGGCGCAAGC TTTCGTCGTC
GAGGAGGGCA ATCGGGTCAT GCTGCGTCCC CTGAATACGG GTGCGCTGAC GGACGCGGGT
TGGATCGTCG AGGAAGGGCT GCGGCCCGGC GAGATCGTCG TGGTTGAGGG TTTCCAGAAG
ATCCAGCCGG GTGTCAGCGT GAAGCCGGTG CCCTGGAAGG GCAGCCGGAC CGCCGAGACC
TCGGCCAGGC CCTGA
|
|---|
| Protein sequence | MQIHRPTSRA LPLVVPLWLT LAACQPLSRD SSSAASVPEV STVAAAAATV PLTLDLPGRL
APTRVAEVRA QVSGIIQERM FEEGSLVRKG DVLFRIDPAV YKAEVDARAA ALDRAEATRD
QALRQSERAE TLLERQATSS AQHDIAVAAL RQAEADVASA RAQLARARIE LDYATVRAPI
GGRIGRALAT EGALVSQNDA TRLAVIQQID PIYADFMQSA SDPSPLTERA AGKEATEVRL
VDSDGTPYAD TGQLLFTDAS VDPGTGQVSL RATFPNPRAA LLPGTYVRVR VAQGVKADAT
IVPAQAIQRS SAGEAQAFVV EEGNRVMLRP LNTGALTDAG WIVEEGLRPG EIVVVEGFQK
IQPGVSVKPV PWKGSRTAET SARP
|
|---|
| |