Gene Mnod_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2928 
Symbol 
ID7304100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp3023310 
End bp3024947 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content74% 
IMG OID643600636 
ProductDEAD/DEAH box helicase domain protein 
Protein accessionYP_002498182 
Protein GI220922880 
COG category[J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0513] Superfamily II DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTTTTC CTCCCGTTCC CGCCCCGCTC GCCCGTGCCC TCGACGCGCG GGGCTATGCC 
GATCCGACGC CGGTCCAGGC CGCCGTGCTC GAACCCGCCG TCGCAGGGCG CGACCTCCTG
GTCTCGGCCC AGACCGGCTC CGGCAAGACC GTGGCATATG GCCTCGCCAT GGCGGATACG
CTGCTCGATG GCGGCGAGAC GCTGCCCCCG CCCGGGGCTC CGCTCGCCCT CGTGATCGCG
CCGACGCGCG AGCTAGCGCT TCAGGTCCAT CGCGAGCTGT CCTGGCTCTA CGGAGCGGCC
GGGGCGCGGG TGGCGGCCTG CGTCGGCGGC ATGGATCCGC GCCGGGAGAG CCGCCTGCTC
GGTGAGGGCG TGCACATCGT CGTCGGGACG CCGGGCCGCC TGCGCGACCA CCTGGAGCGG
CGCAATCTCG ATCCGTCGCG GATGAGGGCG ACCGTTCTCG ACGAGGCCGA CGAGATGCTG
GATCTCGGCT TCCGCGAGGA CCTGGAATTC ATCCTGGGCG CGACGCCGGC CGAGCGGCGC
ACCCTGCTGT TCTCCGCGAC GCTGCCGAAG GGCATCGTGG CGCTCGCCGA GCATTACCAG
CGCGAGGCGC TGCGCATCGC GGTCGCGGGC GAGACCCGCG GGCATGCCGA TATCGAGTAC
CGGGCGCTGC GCATCCTGCC ACGCGAGACC GAGCTCGTGG TGGTCAACAC CCTGCGGCTG
GTCGAGGCGC GCACCGCCAT CGTGTTCTGC AACACCCGGA ACGCAGTGCG CCACCTGCAG
GCGGTGCTCA CCGAGCGCGG CTTCACGGCG GTGGCGCTCT CGGGAGAGCT CGGCCAGGGC
GAGCGCAACG CGGCGCTGCA GGCGCTGCGG GACGGCCGTG CCCGGGTCTG CGTGGCCACC
GACGTGGCGG CGCGCGGCAT CGACCTCCCG GGGCTCGGCC TCGTCATCCA TGCCGAGCTG
CCGCACGATG CCGAGGTGCT CCAGCACCGC TCGGGCCGCA CCGGCCGCGC GGGCCAGAAG
GGCATCAGCG TCCTCCTGGT CCCGCCCTCC CGGCGTCGCA AGGCCGAGGA GCTGATGGCC
CGGGCGGGCG TGGTGCCGGT GTGGTCCGGT CCGCCGCCGG CCGACGAGAT CCGCGCTCTC
GACCAGGAGC GGCTGCTCGC CGATCCGCTC CTCACGGACG AAACGAGCGA GGAGGATCGG
GCGATGGCGC AGGCGCTCCT CGCGCGCTGC TCGGCCGAGG ATCTCGCGGC CGCTCTGGTG
CGCGCCTATC GGGCCCGCCT GCCCGCGCCC GAGGAGGTGA CCGATCCGGG TTTTCCGACC
GGCCGTCCCG CCCCGGCGCG CCGCGATAAG CCGCGTGCGC CGCTCGGCCC GAGCGTCTGG
TTCCGTCTCA ATGTCGGCCG GCGCGACAAT GCCGACCCGC GGCGCCTGCT GCCGATGCTG
TGCCGGCGTG GCGGCGTCAC GCGCGACGAG GTGGGGGCGA TCCGCATCTT CGAGCGGGAG
ACGAAGTTCG AGATCCGCGG TGGCGCCGCG GAGCGTTTCG CGGACAGCTT CGGACGCACC
GGCTCCGCCG ACCTGCAGAT CGAGATGCTC GACGCCGTCC CCGACCTTCC CCGCCGCCCC
AGCCGGCGCC GGGGCTGA
 
Protein sequence
MAFPPVPAPL ARALDARGYA DPTPVQAAVL EPAVAGRDLL VSAQTGSGKT VAYGLAMADT 
LLDGGETLPP PGAPLALVIA PTRELALQVH RELSWLYGAA GARVAACVGG MDPRRESRLL
GEGVHIVVGT PGRLRDHLER RNLDPSRMRA TVLDEADEML DLGFREDLEF ILGATPAERR
TLLFSATLPK GIVALAEHYQ REALRIAVAG ETRGHADIEY RALRILPRET ELVVVNTLRL
VEARTAIVFC NTRNAVRHLQ AVLTERGFTA VALSGELGQG ERNAALQALR DGRARVCVAT
DVAARGIDLP GLGLVIHAEL PHDAEVLQHR SGRTGRAGQK GISVLLVPPS RRRKAEELMA
RAGVVPVWSG PPPADEIRAL DQERLLADPL LTDETSEEDR AMAQALLARC SAEDLAAALV
RAYRARLPAP EEVTDPGFPT GRPAPARRDK PRAPLGPSVW FRLNVGRRDN ADPRRLLPML
CRRGGVTRDE VGAIRIFERE TKFEIRGGAA ERFADSFGRT GSADLQIEML DAVPDLPRRP
SRRRG