Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_2827 |
Symbol | |
ID | 7303918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 2904403 |
End bp | 2905887 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643600535 |
Product | type II and III secretion system protein |
Protein accession | YP_002498081 |
Protein GI | 220922779 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.59291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAT TCGTCCCCTT CCGGGCGCTC CGGGCGCTCC TCGCGGCCGG GCTCCTCGCC ACGCCTTCCG GTCTCGCCAG TCCCGCAGCG GCGCAGCAGC GGGTGCCCGC GATGCCAGCT CCGGTGCTCT CCGTCGGGCC GCAGGAGGCC GACATCTCGC GTCGCATCGA CCTCACGCAG GGACGCTCCC TCGTGGTGGA CCTGCCGCGC GACGCCAAGG AGGTCTTCGT CGCCAACCCG AAGGTCGCCA ACGCCGTCGT TCGCTCGACC CGCAAGGTCT TCATCATCGG CGTCGAGAAC GGCGCCACCT CGATCTTCGT GATGGATGCC GAGGGGCGCC AGATCGCCGC CCTCGACGTG ACGGTCGGCC GCGACCTCAA CGTGCTGCGC CAGACCCTGG CGAGCAGCAT CCCCAAGGGG CGGTTCGAGG TCCGCCCGGC GGGCGATTCG ATCCTGCTTT CGGGCAGCGT GAACTCCGCG GCGGAAGCCC AGCAGGCCAT CGACGTCGCC AACGCCTTCG TGGGCATCGG CGGCGGCGGC GTGCCGGGCC GCGGCGCGGT GATCAACAAC ATCACCATCC GCGGCAAGGA CCAGGTCATG CTGCGCGTCA CCGTGGTCGA GGTGTCGCGC TCGGTGCTGA AGCAGTTCGG CGTGAACCTG AGCGGGAACT GGTCGAACCT CAACTTCGCC AACGTCGCGC CGCTGGCCCT CAACGGGGGG AGCTTCCCGA TCGGGAACGC GATCTCGGGC AGCATCAACT TCGGAGGGGG CGCCTCCCTC ACGGCGACGC TGAAGGCCTT CGAGCAGGCC GGCGTCTCGC GCGTCCTCGC CGAGCCGACG CTCACGGCGA TCTCCGGCGA ATCCGCCAAG TTCACCGCCG GCGGACAGCT CCCGGTGCCG GGCAATCTCG CCTGCTCGGC CCCTTCGAAT GGCGTCCAGC TCTGCACGCC GAGCGTCACC TTCAAGCCCT ACGGCGTCAG CCTGACCTTC ACGCCCGTAG TTCTTTCCGA GAACAGGATC TCGATCCGGG TCGGCACCGA CGTGACGGAG ATCGATCCGC AGAACTCGAT GAACATCAAC TTCAGCGGCA CGACCACCGC CATCCCGGGC TTCACGGTGC GGACCTCCGA AACCACGGTC GAGCTCGCCT CCGGCGCCAC CATGATGACG GCAGGCCTGA TTCAGCAGCG CAACCGCGCG GCGATCACCG GCCTGCCCGC GCTGATGAAC CTGCCGATCC TCGGCGCGCT GTTCCGCTCG CGCGACTATC AGCGCGACGA GACCGAGCTG ATGATCATGG TCACCCCCTA CATCGCCAAG GCGATGGAGC CGGCCGAGAT CAAGCGGCCC GACGACGGCT TCGTCGATGC GACCGACGGG CAGGCGGTCC TGCTCGGCCG CTTCAACCGC CTCTACGGCG TGGTCGGGGC CTCGCCCCTC GCCCCGAAGG CCTATCACGG CCGGTTCGGC TTCATCACGG ACTAG
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Protein sequence | MMRFVPFRAL RALLAAGLLA TPSGLASPAA AQQRVPAMPA PVLSVGPQEA DISRRIDLTQ GRSLVVDLPR DAKEVFVANP KVANAVVRST RKVFIIGVEN GATSIFVMDA EGRQIAALDV TVGRDLNVLR QTLASSIPKG RFEVRPAGDS ILLSGSVNSA AEAQQAIDVA NAFVGIGGGG VPGRGAVINN ITIRGKDQVM LRVTVVEVSR SVLKQFGVNL SGNWSNLNFA NVAPLALNGG SFPIGNAISG SINFGGGASL TATLKAFEQA GVSRVLAEPT LTAISGESAK FTAGGQLPVP GNLACSAPSN GVQLCTPSVT FKPYGVSLTF TPVVLSENRI SIRVGTDVTE IDPQNSMNIN FSGTTTAIPG FTVRTSETTV ELASGATMMT AGLIQQRNRA AITGLPALMN LPILGALFRS RDYQRDETEL MIMVTPYIAK AMEPAEIKRP DDGFVDATDG QAVLLGRFNR LYGVVGASPL APKAYHGRFG FITD
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