| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2812 |
|---|
| Symbol | |
|---|
| ID | 7303903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 2890763 |
|---|
| End bp | 2891779 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643600520 |
|---|
| Product | anaerobic benzoate catabolism transcriptional regulator |
|---|
| Protein accession | YP_002498066 |
|---|
| Protein GI | 220922764 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTG GTCCCTCCCT CTCTCTCGCG CGGCCCCCCT CCGATGCGCA GGCTTCCTCC
GGCGTTGCGA CCCGGGATCG TCCGGTGAAC GACGGCACGG CGCACGGCAC CGGCGAGGAG
GCCGAGGGCC GCTTCCTCGC CGAGCTCGGC CAGCGCGTGC GGACCGCGCG GGCCGTGCGG
GCCATGTCCC GCAAGGTGCT GTCGCAGACC TCCGGGCTCT CGGAACGCTA CATCGCGCAG
CTCGAGACCG GGCAGGGCAA CGTCTCGATC ATCCTCCTGC GCCGGGTGGC GAACGCGATG
GGCGTGCGGC TGGAGGATCT GATCGCCCCG ATCGACAGCT CGCCCGACTG GCCGGTGGTG
CGCGACCTGC TGCAGGGTGC CTCGGCCGCG CAGGTGGCGG AAGCCAAGCG CATCCTCTCG
GGCGTCGGCG GCATGCGGGC CGACGAGGCC GGCCGGGCCG GCGAGGCCGG CCCCCTGCGG
GTGGCGCTGA TCGGCCTGCG CGGCGCGGGC AAATCCACCC TCGGGCGCAT CCTCGCGGAG
CGGCTCGGCT GGCGCTTCGT CGAGCTCAAT CGCGAGATCG AGCGCGAGAA CGGCCTTTCG
GTGGCGGAAA TCTTCGCGAT CTATGGCCAG GAAGGCTATC GGCGCCTGGA GCAGACGGCG
CTGCGCCGCT TCACGGCCGA TGAGGGGCCG CTGGTGCTGG CGACCGGCGG CGGCATCGTC
GCCGAGCCGC TCACCCTCGA TCTCCTTCTG TCCTCCTTCT TCACCGTCTG GCTGAAGGCG
CGGCCGGAGG AGCACCTGCG CCGCGTGCGC GAGCAGACGG CGCTCGGCGC CGCCCCGGCG
CGCCTACCCG ACAACGACCG GGCGCTGCGC GAATTGCGGG CGGTGCTCAT CAGCCGCGAG
CCGCTCTATG CCCGGGCCCG GGCGGTGCTC GACACCGCCG ATCTCACCGT GGCGGAGACG
GCCGGGCGCC TCACGGGCCT GGTCGAGGGG CATTTCGGCC TGCGGCAGCG CCGCTGA
|
|---|
| Protein sequence | MSPGPSLSLA RPPSDAQASS GVATRDRPVN DGTAHGTGEE AEGRFLAELG QRVRTARAVR
AMSRKVLSQT SGLSERYIAQ LETGQGNVSI ILLRRVANAM GVRLEDLIAP IDSSPDWPVV
RDLLQGASAA QVAEAKRILS GVGGMRADEA GRAGEAGPLR VALIGLRGAG KSTLGRILAE
RLGWRFVELN REIERENGLS VAEIFAIYGQ EGYRRLEQTA LRRFTADEGP LVLATGGGIV
AEPLTLDLLL SSFFTVWLKA RPEEHLRRVR EQTALGAAPA RLPDNDRALR ELRAVLISRE
PLYARARAVL DTADLTVAET AGRLTGLVEG HFGLRQRR
|
|---|
| |