Gene Mnod_2801 details

Gene Information

• Locus tag: Mnod_2801
• ID: 7303892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 2881378
• End bp: 2883264
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643600509
• Product: diguanylate cyclase
• Protein accession: YP_002498055
• Protein GI: 220922753
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.615763
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCACCC ACCTCTTCAC GCTGCCGACA TTCAAAAAGA AGCTCACAAC CGGAGCAAGA 
AAGCCGAACG GTGCGATCCG TCGCCAAGCG GGATACACCG GCATTCGCTA TAGCTTTGAG 
CAAAAACTGT CGATCCGTGT GTTTCTTGTC ATTCTCTGCA CAGCCACCCT CGCATTCACG 
ATCATCGCCC CCACCTATCA CGCGTTCACC CTGGCGCGAC AGAACCTGCA CGACATTCAG 
GATTACCGGC TGATCCTGGA CGCGGCGACC TACATTTCGG CCGAGCGCGG TCCGGCCAAT 
ATCGTCATGT CCGAAGAGCC GTCATCCGAC AGCATCGGGG CAAAGCGCCT TGCGGAGTAT 
CGGGCGCGCA CCGATGCGGC ACTCGCCCGG ATCGCCACGG CGTCCGACGC CCCGTTCGGG 
CTCCACAACC ACCCGGTCCC GACCGGCCTG CTCGCGCGGG TCCGCGATCG GCTCGCCGCA 
GCGAGGGCCA AGGTCGATCA CGTGGCGTCC CGTCCGCGCT CGCCGCTCAA ACGCGAGGAG 
TTCCAGGACG CGATCGAAAG CATGTTCGCG GTGTTCGACG CATTCCAGGC TATCGTCTCG 
TGGAGAGCAG ACGCGCTTGT CCAACACGAC AGCGGCCTCG CTGCGCCCGT CCTCGTCGGT 
CAGATGCTGA GCGACCTTCG CGAGTATGGC GGCAGAATCG GCTCGGAGAT CATCGCTCCG 
ATCGCGACCG GAGAGAGGCT GCCCCTGAAG AATGTCGTCG ACAGCAGGCG AAGCCAGCGC 
AGGTTGCTCG AACTCTGGCA CATCATCCGG AGCCAGAGCG CACTTTACGG CAACCCGTCG 
CTGGCGGCGG GCCGCGCGGA AATCGACAGG CATTTCTTCG GCGACAGTCT CGGCTTGATC 
GACCGGCTGA TCAGAGAGGG CCGGCAGCAG GGACGCTACT CCATGACGGC GACCGAATTC 
ACCGAGCGCT TCGTTCCGAC GATGCGGCCG ATCGAGTCCT ATCGCCGCGC CTTCCTCGAT 
GCCGCCGTCG AGAGATTCGT GGAGGCGCGC GCCTTGGCCC TGGCGACGCT GACGACGGCC 
GTGCTGGTGA CCTCGGCCAC CGTCGCGCTC TTGATCGGCC TCATCCTCTC CATCAGGATT 
CACATTTTCC GCCCGCTCAT CCACGCCCAT GAGGAGGTCC GCAGGCTGGC CGAGGATCGG 
CCGGCCGTGC GTCAGCCGCG CCCGAGCCAG GCCGGTGAGA TCCTCAGCCT GTTTCAGGCC 
ATCGAGGTGC TCCAAGGCAA GATCGAGGAG CGTGCAACGA TGACGAGCGA GTTGCGGGTT 
CAGGCGGAGA CGGATGGCCT GACCGGGCTC CTGAATCGCC GCATGCTGGA TCGCCTCGCG 
CAATCGCCAC CCGGAAGCGC CGACGACAAG GTATGCCTCA TCCTCATCGA CATCGATCAC 
TTCAAGGCGA TCAACGACAC CTACGGCCAC GCGACCGGCG ATCGCGTGCT GATCCAGATG 
GCCGAGCTGC TGCAGTCTGT GCTCCGCGCC AGCGACGTCA TCGCTCGGTT CGGAGGCGAG 
GAATTCGCCG TTCTCGTGCC GGGCGCCGAC CTGTCGGGCG CGATCACGGT GGCCAGAAAG 
GTTCGCATCG CTCTGCAACG CGCGCGTTTC ACGACGCCGG ACGGGACGCC CGTCAGGGTG 
ACGGCGAGCT TCGGCGTTGC GCGTGGTCGG CGCGGCCAAG AGGCGTGGCC ATGTCTGGTC 
GAGCTCGCCG ACGAGGCGCT CTATCGGGCC AAGTCGGACG GCCGCAATCG CGTTCGCTTC 
GCGCGACGCA TGGCGACGTC CGACCTCGCG CCCTCATCGC ACGACGCTCG CGCGCCGGCC 
GCCATGGATC TCGGGTCCGC TCGGTGA 

 

Protein sequence

MRTHLFTLPT FKKKLTTGAR KPNGAIRRQA GYTGIRYSFE QKLSIRVFLV ILCTATLAFT 
IIAPTYHAFT LARQNLHDIQ DYRLILDAAT YISAERGPAN IVMSEEPSSD SIGAKRLAEY 
RARTDAALAR IATASDAPFG LHNHPVPTGL LARVRDRLAA ARAKVDHVAS RPRSPLKREE 
FQDAIESMFA VFDAFQAIVS WRADALVQHD SGLAAPVLVG QMLSDLREYG GRIGSEIIAP 
IATGERLPLK NVVDSRRSQR RLLELWHIIR SQSALYGNPS LAAGRAEIDR HFFGDSLGLI 
DRLIREGRQQ GRYSMTATEF TERFVPTMRP IESYRRAFLD AAVERFVEAR ALALATLTTA 
VLVTSATVAL LIGLILSIRI HIFRPLIHAH EEVRRLAEDR PAVRQPRPSQ AGEILSLFQA 
IEVLQGKIEE RATMTSELRV QAETDGLTGL LNRRMLDRLA QSPPGSADDK VCLILIDIDH 
FKAINDTYGH ATGDRVLIQM AELLQSVLRA SDVIARFGGE EFAVLVPGAD LSGAITVARK 
VRIALQRARF TTPDGTPVRV TASFGVARGR RGQEAWPCLV ELADEALYRA KSDGRNRVRF 
ARRMATSDLA PSSHDARAPA AMDLGSAR