Gene Mnod_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2588 
Symbol 
ID7305122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2673938 
End bp2676238 
Gene Length2301 bp 
Protein Length766 aa 
Translation table11 
GC content68% 
IMG OID643600307 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002497854 
Protein GI220922552 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACC CTGGAACCCA CGATACGACG CTGGTCGCAC TCTCTGTGCT GATCGCGGTG 
ATCGCCTCCT ACACCGCCCT TGATCTCGCC ACGCGCATCC GCGCGTCCTC CGGCTGGGCG
GCCTATGCGT GGCTGGCCAC CGCCGCGCTC GCGATGGGCG GCGGCATCTG GTCGATGCAT
TTCGTGGCCA TGCTGGCCTT CAGCCTGCCA GGAGTGGAGG TGGGCTATGA TCTCACCCTC
ACACTGATTT CGCTGGCACT CCCGATCGCC GTGACGGCGC TCGGCTTCTT CGTTGCGAAC
CGAAGAGAGA CGAGTCCGCT CGCCTTGGCA GTCAGCGGTC TCGTCATGGG GCTCGGCATC
GCCGCCATGC ACTACACGGG CATGGCGGCC ATGCGCATGC CTGCCGACCT GCGCCACGAC
CACCTCTGGG TCGCGCTCTC CCTGCTGATC GCGATCGGAG CCGCGACCGT CGCCCTCTGG
CTCGCCTTTC AGATCGTCAG CTTCGGCCAG CGGCTCGCGG CCTCGGTGGT GATGGGGCTC
GCCATCTCGG GCATGCACTA CGCCGCCATG CAGGGGGCGG TCTTCACGGC GCACGCGCCG
GTCGACCACG CCCAGGGTGT TGCCAGCCTC CACCAGACCT ACCTCGCCCT CTGGGTCACG
GGAACGACGC TCCTCATCCT CATCCTGGCG CAGATCGCTG CCGTGTTCGA CCGCCACTTC
GCGCACCGCG CCGAGCGCGA AGCGGCGGCC TTGCGCGAGA GCGAGGAACG CTTCCGCCTG
CTGCTCCGGA GCGTGACCGA CTACGCCATC TTCATGCTCG ACACCGAGGG CCGGGTCGCG
AACTGGAACG CGGGCGCCGA GCGCATCAAG GGCTACAGCG ACCGCGAGAT CGTCGGGACG
CACTTCTCCC GCTTCTACAC CCAGGAGGAT CAGGCGCGCG GGCTGCCTGC GGACGCTCTC
CGAACCGCTG CGAGCGTCGG CAAGTTCGAG CAGGAGGGAT GGCGCGTCCG CAAGGACGGC
AGCCGGTTCT GGGCCAGCGT GGTCATCGAC CCGGTGCGGG ACCAGGACGG CCGCCTGATC
GGCTATGCCA AGGTCACCCG CGACATCACC GAGCGCAAAC AGGCCCAGGA CGCCCTGGAG
CAGGCGCGTG ATGCCTTGTT CCAGGCCCAG AAAATGGAGG CGGTGGGCCA ACTTACGGGC
GGCGTCGCGC ACGACTTCAA CAACCTGCTA TCGGTCGTTC TCGCCAGCCT CGACGTGCTC
AAGAAGCGCC TGCCGGATGA CCCCAAGCTG CGGCGGCTGC TCGACAATGC CGAGCAGGCC
ACTCAACGGG GAGCGGCCCT GACGCAGCGC ATGCTCGCCT TCGCCCGGCG CCAGCACCTG
AAGCCGCAGG CGGTGGACCT GGCGAGCCTC GTGCACGGGA TGTCGGACCT CCTTCAGCGG
TCGCTCGGCC CGACCGTGCA GATCGAGACG CGCTTTCCCC TGAGCCTCCC AGTGGTGATG
GCTGACGCGC ACCAGCTTGA ACTGGCGCTG CTCAACCTCT CGGTGAATGC GCGCGACGCC
ATGCCCAAGG GCGGTGCGAT CACCATCTCA GCCTGCGAGG GCGACCAACC CTCAGACCTC
GGCGGAGGCC GCTACGTTTG CCTTGCTGTG GCTGATACGG GCCATGGCAT GGATGAGGCG
ACACTGGCGC GGGCGCAGGA GCCGTTCTTC ACCACCAAGG GGATCGGCAA GGGCACCGGC
CTTGGTCTCT CGATGGTGCA TGGGCTGGCC GAGCAGTCGA ACGGGCGGCT CGTGCTTAAG
AGCCGCCTGG GCGAAGGCAC GACAGCGGAG ATTTGGCTGC CGGTCGCCTC GGTCGCCGCC
GAGGAGGAGA AGTCGGTCGA CGTGGTGCCG CTCTCACCCC AAGCCATTCG CTCGCTGAGC
GTGCTCGTGG TCGACGACGA CCTCCTGGTG CTGGAAAACA CGGCCGTGAT GCTGGAGGAC
TTGGGCCACC GCGTGATGAA GGCCCGCTCC GGGCAGGAGG CGCTCGACCT GCTGGAAGGC
GCTCGAATGC TTGATCTCGT CATCACGGAT CAGGCGATGC CGAACATAAC GGGACCGCAA
CTGCTTGAGC GGATCCGAGC CGTCCGCCCG CAGGTCAGAG CCATTGTGGC GACGGGCTTT
GCCGAGGGTG GCTTGGACGA CTGGAGCGTC GTGCGGCTCA GCAAACCGTT CGACCAGGGG
ACGCTCGCGC GCATGATCCA CTCGGTCATG TACGCGTCCG ACGACAGGCG GGTCGTGAGC
CTCCGTCCGC GGGCTGGTTG A
 
Protein sequence
MPHPGTHDTT LVALSVLIAV IASYTALDLA TRIRASSGWA AYAWLATAAL AMGGGIWSMH 
FVAMLAFSLP GVEVGYDLTL TLISLALPIA VTALGFFVAN RRETSPLALA VSGLVMGLGI
AAMHYTGMAA MRMPADLRHD HLWVALSLLI AIGAATVALW LAFQIVSFGQ RLAASVVMGL
AISGMHYAAM QGAVFTAHAP VDHAQGVASL HQTYLALWVT GTTLLILILA QIAAVFDRHF
AHRAEREAAA LRESEERFRL LLRSVTDYAI FMLDTEGRVA NWNAGAERIK GYSDREIVGT
HFSRFYTQED QARGLPADAL RTAASVGKFE QEGWRVRKDG SRFWASVVID PVRDQDGRLI
GYAKVTRDIT ERKQAQDALE QARDALFQAQ KMEAVGQLTG GVAHDFNNLL SVVLASLDVL
KKRLPDDPKL RRLLDNAEQA TQRGAALTQR MLAFARRQHL KPQAVDLASL VHGMSDLLQR
SLGPTVQIET RFPLSLPVVM ADAHQLELAL LNLSVNARDA MPKGGAITIS ACEGDQPSDL
GGGRYVCLAV ADTGHGMDEA TLARAQEPFF TTKGIGKGTG LGLSMVHGLA EQSNGRLVLK
SRLGEGTTAE IWLPVASVAA EEEKSVDVVP LSPQAIRSLS VLVVDDDLLV LENTAVMLED
LGHRVMKARS GQEALDLLEG ARMLDLVITD QAMPNITGPQ LLERIRAVRP QVRAIVATGF
AEGGLDDWSV VRLSKPFDQG TLARMIHSVM YASDDRRVVS LRPRAG