| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2570 |
|---|
| Symbol | |
|---|
| ID | 7305104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 2657500 |
|---|
| End bp | 2658444 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643600290 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_002497837 |
|---|
| Protein GI | 220922535 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CCTGGCTGAT TTATTTTCTA ATATTTTCGG CAGTATTTTT GACTGTCCAG
TTCGGTTTTC TGTTCTTTGG ACGTGGTGTC TTTACGAGAA GACGGCTCAA CAGGCGCCTG
TCGGCCATTG AGGATGGGAC CTATAAGCCC TATTTGGAGC CCTTGCGTCG CAAGGCCTCG
CCAAGCGACG CCTCTGGTCT CCTCAGCAGT CTCACGACGA TTTTCGCGCA AGCAGGCGGC
GCGAGTGCCG CTCCGGCAAT CACGCTCACC TCCGCGTCGG CTTTCGCTCT CTGTTGGGCC
GGATCTTACG CTCTGGTGCG GTCCGTTCCT GTCGGAATGC TGCTGGCCCT GCTCGGCGCC
AGTACGGGCG GGATCGGGAC CATGTATTAT CTTCGCCGTC GGCGGGTTGC TGCGTTCGGA
GAGCAACTCC CGGAACTCCT CGAGATCATG GTCAGAAGCT TGCGCGCAGG TCATCCGCTG
GTCGTCGCCT TTACATTGGC CGCCAAGCAA ATGCCGGACC CTGCAGGTTC TGAAATTGGC
ATAACGGCGG ATGAGATCGG CTACGGGCGC GACGTCGGGG CGGCGCTCTA TAATTTATAT
CGTCGGGTGG GATTCGAAGA CCTGCGCTTC TTCGCGACGG CTGTGACCAT TCAGGCGCAA
ACGGGCGGCA ACTTAGCGGA AATCCTGGCC CGCCTTGCGA CGCTGCTGCG CGAGCGCGCT
CGGCTCAGAC AGCGAGTGCG CGCGTTGTCG GCGGAGGGCC GCCTGTCCGC CCTAGCCTTG
AGCCTCTTTC CGTTTCTGCT AGCAGGTCTC ATCACGCTCC TTAATCCAGA TTACTATGGT
TCTGTTTGGG GGAATCCACT GTTCGATCTA GCTCTCACCG TTGCCGGAGG CATGCTGATA
ATCGGCAATA TTGTCCTGTA CCGCATAGTG AACTTCAGGA TTTGA
|
|---|
| Protein sequence | MTEPWLIYFL IFSAVFLTVQ FGFLFFGRGV FTRRRLNRRL SAIEDGTYKP YLEPLRRKAS
PSDASGLLSS LTTIFAQAGG ASAAPAITLT SASAFALCWA GSYALVRSVP VGMLLALLGA
STGGIGTMYY LRRRRVAAFG EQLPELLEIM VRSLRAGHPL VVAFTLAAKQ MPDPAGSEIG
ITADEIGYGR DVGAALYNLY RRVGFEDLRF FATAVTIQAQ TGGNLAEILA RLATLLRERA
RLRQRVRALS AEGRLSALAL SLFPFLLAGL ITLLNPDYYG SVWGNPLFDL ALTVAGGMLI
IGNIVLYRIV NFRI
|
|---|
| |