| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_2188 |
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| Symbol | |
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| ID | 7302483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 2298303 |
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| End bp | 2299907 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643599925 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_002497473 |
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| Protein GI | 220922172 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.521622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGTT TCTCCACCTC GAAGATCGTC GGGACGCTGG CGGTGATCAT CGTCGGGCTC
GCCCTCGCGA TCCCGAGCTT CTTCTCGCCC GAGCAGCGCA AGGCCTTCGT GGCCTCGGCG
CCCTCCTGGC TGACCGCAAT CGTGCCGACC CGCGCGATCG TGCTCGGCCT CGACCTGCAG
GGCGGCTCGC AGATCGTGCT GGAGGTCGAC CGGCCCGATC TGCAGCGCAC CATGGCGCAG
CAGCTGCGCG ACGACGTGCG CCGGGCGCTC CGCGAGGAGG GCGTCCAGGC CGATGGCGGC
ATTCAGCTCA CGCCCCGCGG CGTGCAGCTG CGCATCGGCG ACGCGGCGAA TCGCGCCAAG
GCCATGCCGA AGCTCCAGGC CCTGTCGCAG CCGGTCGCCG ACGCGGTGCT CGGCCAGACC
GGCGCCCGCA CGCTCGAGCT GCGTGAGGAG CCGAACGGCT CCATCCAGCT CGCCTTCACG
GAGGCCGGGA TCAATGCCCG CATCCGCCGC GCCGTCTCGC AGGCGATCGA GGTGGTGCGC
CGCCGCGTCG ACCTCGGCGG CACAACGGAA CCCTCGATCC AGCAGCAGGG GGCGGACCGT
ATCCTCGTCC AGGTGCCGGG CCTGCAGGAT CCGCAGCGCC TGGAGGAGCA GCTCGGCAAG
ACCGCCAAGC TCGAATTCCG CATGCTCGCC GACAGCCCGG CGGGCGACGT CGACATGCTG
CCCTCCCGCG ATGCCGGCGG CCAGAAGGTG CCGGTGGAGC GCCGCGTGAT GGCGGACGGC
GCCGACCTCA CCGACGCGCA GCCGGGCTTC GACCAGAAGA CCAACGAGCC GATCGTCAAC
TTCAAGTTCA ACCTGCGCGG CGCCCAGCGC TTCGGCCAGG CGACGAGCGA GAATGTCGGC
CGGCCGATGG CGATCGTCCT CGACAACGAG GTGGTCTCCG CGCCGCGCAT CCTGCAGCCG
ATCACCGGCG GCCAGGGCCA GATCTCCGGC CGCTTCACGG TCCAGCAGGC CAACGACCTC
TCGGTGCTGC TGCGGGCGGG CGCGCTGCCG GCCAAGCTCA ACATCATCGA GCGCCGGACC
GTCGGCCCGG GCCTCGGCCG CGACTCGATC GAGGCCGGCA AGCACGCCAC CCTGGCGGCG
ACGCTCCTCG TCGTCACCAT GATGTTCGCC TGCTACGGCG TGTTCGGCCT CTTCGCCAAC
ATCGCCCTCC TGGTCCATGT CGGGCTCATT CTCGGCCTGA TGTCGGTGCT GGAGGCGACG
ATGACGCTGC CCGGCATCGC CGGCATCGTG CTCACCATCG GCACGGCGGT CGACTCGAAC
GTGCTCATCT ACGAGCGCGT GCGCGAGGAG GTGAGGGCGG GCCGCTCCAT CCCCTCGGCC
CTGCAGGCGG GCTTCGACCG CGCCTTCGCG ACCATCGTCG ATTCGAACTC GACCATGGCG
ATCGCCGCGA TCATCCTGTT CTTCCTCGGC TCGGGTCCGG TGCGCGGCTT CGCGGTGGTG
TTCATCCTCG GCATCATGAC CACCGTGATC ACGGCCGTCA CGCTGACCCG GATGATGATC
GCGGTCTGGT ATCACCGCTT CCGGCCGAAG GTTCTGCCGA TCTGA
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| Protein sequence | MLRFSTSKIV GTLAVIIVGL ALAIPSFFSP EQRKAFVASA PSWLTAIVPT RAIVLGLDLQ
GGSQIVLEVD RPDLQRTMAQ QLRDDVRRAL REEGVQADGG IQLTPRGVQL RIGDAANRAK
AMPKLQALSQ PVADAVLGQT GARTLELREE PNGSIQLAFT EAGINARIRR AVSQAIEVVR
RRVDLGGTTE PSIQQQGADR ILVQVPGLQD PQRLEEQLGK TAKLEFRMLA DSPAGDVDML
PSRDAGGQKV PVERRVMADG ADLTDAQPGF DQKTNEPIVN FKFNLRGAQR FGQATSENVG
RPMAIVLDNE VVSAPRILQP ITGGQGQISG RFTVQQANDL SVLLRAGALP AKLNIIERRT
VGPGLGRDSI EAGKHATLAA TLLVVTMMFA CYGVFGLFAN IALLVHVGLI LGLMSVLEAT
MTLPGIAGIV LTIGTAVDSN VLIYERVREE VRAGRSIPSA LQAGFDRAFA TIVDSNSTMA
IAAIILFFLG SGPVRGFAVV FILGIMTTVI TAVTLTRMMI AVWYHRFRPK VLPI
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