Gene Mnod_2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_2087 
Symbol 
ID7305021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp2185591 
End bp2186319 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID643599820 
Productprotocatechuate 3,4-dioxygenase, beta subunit 
Protein accessionYP_002497375 
Protein GI220922074 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.419752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA TCGACAGGGA ATTCCTGCAG CGCGACCGGC GCATCCACCC TCCGGCCTTC 
ACGGCCGATT ACAAGACGAG CGTGCTGCGC TCGCCGCAGC GGCCCCTGAT CTCGCTGCAA
TCCTCGCTCT CCGAGGTGAC CGGCCCGGTC TTCGGCCAGT CGGAACTCGG CCCCCTCGAT
AACGACCTGA TCCTGAACTA CGCCAAGGAC GGCGAGCCGA TCGGCGAGCG CATCCTCGTG
CATGGCCTCG TCCGCGACGA GAACGGGCGC GGCGTGCCCC ACACGCTGGT GGAGTTCTGG
CAGGCCAATG CGGGCGGGCG CTACCGCCAC CGCAACGACC GCTATCTCGC GCCGATCGAT
CCGAATTTCG GCGGCTGCGG CCGGGCGCTG ACGGACGAGA ACGGCTACTA CTACTTCCGC
ACCATCAAGC CCGGCCCCTA TCCGTGGCGC AACTTCCTCA ATTCGTGGCG CCCCGCCCAT
ATCCATTTCT CGGTGTTCGG CTCCGGCTTC GCCCAGCGTC TCATCACCCA GATGTACTTC
GAGGGCGACC CGCTGATCTG GCGGGATCCG ATGGTGCTCG GGATCCCGGA CCGCGCCGCG
GCCGAGCGGC TGATCGCGCC GCTCGATCTC GAATCCGCGC TTCCGATGGA CATGCTGGCC
TACCGGTTCG ACATCGTGCT GCGCGGGCGC CAGCAGACGC TGTTCGAGAA CAAGCTGCAG
GGGAATTGA
 
Protein sequence
MTEIDREFLQ RDRRIHPPAF TADYKTSVLR SPQRPLISLQ SSLSEVTGPV FGQSELGPLD 
NDLILNYAKD GEPIGERILV HGLVRDENGR GVPHTLVEFW QANAGGRYRH RNDRYLAPID
PNFGGCGRAL TDENGYYYFR TIKPGPYPWR NFLNSWRPAH IHFSVFGSGF AQRLITQMYF
EGDPLIWRDP MVLGIPDRAA AERLIAPLDL ESALPMDMLA YRFDIVLRGR QQTLFENKLQ
GN