Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_2087 |
Symbol | |
ID | 7305021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 2185591 |
End bp | 2186319 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643599820 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_002497375 |
Protein GI | 220922074 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.419752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAGA TCGACAGGGA ATTCCTGCAG CGCGACCGGC GCATCCACCC TCCGGCCTTC ACGGCCGATT ACAAGACGAG CGTGCTGCGC TCGCCGCAGC GGCCCCTGAT CTCGCTGCAA TCCTCGCTCT CCGAGGTGAC CGGCCCGGTC TTCGGCCAGT CGGAACTCGG CCCCCTCGAT AACGACCTGA TCCTGAACTA CGCCAAGGAC GGCGAGCCGA TCGGCGAGCG CATCCTCGTG CATGGCCTCG TCCGCGACGA GAACGGGCGC GGCGTGCCCC ACACGCTGGT GGAGTTCTGG CAGGCCAATG CGGGCGGGCG CTACCGCCAC CGCAACGACC GCTATCTCGC GCCGATCGAT CCGAATTTCG GCGGCTGCGG CCGGGCGCTG ACGGACGAGA ACGGCTACTA CTACTTCCGC ACCATCAAGC CCGGCCCCTA TCCGTGGCGC AACTTCCTCA ATTCGTGGCG CCCCGCCCAT ATCCATTTCT CGGTGTTCGG CTCCGGCTTC GCCCAGCGTC TCATCACCCA GATGTACTTC GAGGGCGACC CGCTGATCTG GCGGGATCCG ATGGTGCTCG GGATCCCGGA CCGCGCCGCG GCCGAGCGGC TGATCGCGCC GCTCGATCTC GAATCCGCGC TTCCGATGGA CATGCTGGCC TACCGGTTCG ACATCGTGCT GCGCGGGCGC CAGCAGACGC TGTTCGAGAA CAAGCTGCAG GGGAATTGA
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Protein sequence | MTEIDREFLQ RDRRIHPPAF TADYKTSVLR SPQRPLISLQ SSLSEVTGPV FGQSELGPLD NDLILNYAKD GEPIGERILV HGLVRDENGR GVPHTLVEFW QANAGGRYRH RNDRYLAPID PNFGGCGRAL TDENGYYYFR TIKPGPYPWR NFLNSWRPAH IHFSVFGSGF AQRLITQMYF EGDPLIWRDP MVLGIPDRAA AERLIAPLDL ESALPMDMLA YRFDIVLRGR QQTLFENKLQ GN
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