| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1901 |
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| Symbol | rpoB |
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| ID | 7305932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | + |
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| Start bp | 2000655 |
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| End bp | 2004779 |
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| Gene Length | 4125 bp |
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| Protein Length | 1374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643599636 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002497193 |
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| Protein GI | 220921892 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.727918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACA CGCTGGTCGG TCGCAAGCGC ATTCGCAAGT TCTTCGGCAA GATCCGGGAA
GTCGCCGAGA TGCCGAACCT CATCGAGGTC CAGAAGGCGT CCTACGACCA GTTCCTGATG
GTGGACGAGC CCGAGGGCGG CCGTCCTGAC GAAGGATTGC AATCGGTCTT CAAGTCCGTC
TTCCCGATCT CCGACTTCTC CTCGACCGCG CTGCTCGAGT TCGTGAAGTA CACCTTCGAG
GCGCCGAAAT ACGATGTCGA CGAGTGCCGG CAGCGGGGCA TCACCTTCGC CGCCCCGCTG
AAGGTGACGC TGCGCCTCAT CGTGTTCGAT GTCGATCCGG ATACCGGCGC CAAGTCGGTC
AAGGACATCA AGGAGCAGGA CGTCTACATG GGCGACATGC CCCTGATGAC GGAGAACGGC
ACCTTCATCG TCAACGGCAC CGAGCGCGTG ATCGTCTCGC AGATGCACCG CTCGCCGGGC
GTCTTCTTCG ACCACGACAA GGGCAAGACC CATTCCTCGG GCAAGCTCCT GTTCGCTGCG
CGCATCATCC CCTACCGGGG CTCCTGGCTC GACGTGGAGT TCGACGCCAA GGACATCGTC
TATGCGCGCA TCGACCGGAA GCGGAAGATC CCGGTCACCT CGCTGCTGTT CGCCCTCGGC
CTCGACGGCG AGGAGATCCT GTCCACCTTC TACAACCGCA TCAGCTACAC CCGCGACGGC
GCGGATTGGC GCGTGCCCTA CGACGCCGAG CGCCTGAAGG GCTTCAAGGC CTCGACGGAC
CTCATCGACG CCGATTCGGG CGAGGTGGTG CTGGAGGCCG GCAAGAAGCT GACCGCCCGG
TCCGCCCGGC AGATCGCCGA GAAGGGCGTC ACCGCCCTGC GCGCCACCGA CGAGGACCTG
ATCGGCCAGT ACATCGCCGA GGACATGGTC AACTACAAGA CCGGCGAGAT CTACGCGGAG
GCGGGCGACG AGATCAGCGA GAAGCTGCTG AAGGGGCTCG CCGATGTCGG GATCGAGGAG
ATCCCGGTGC TCGACATCGA CCACGTCAAT GTCGGCCCCT ACATCCGCAA CACGCTCGCG
GTGGACAAGA ACTCGAACCG CGAGGGCGCG CTGTTCGACA TCTACCGGGT GATGCGCCCG
GGCGAGCCGC CGACGCTCGA CACCGCCGAG GCGATGTTCC ACTCGCTGTT CTTCGACGCC
GAGCGCTACG ACCTCTCGGC CGTCGGCCGC GTGAAGATGA ACATGCGCCT CGACCTCGAC
GCGCCCGACA CGATGCGGAC GCTGCGCCGC GACGACATGC TCGCGGTCGT CAAGGCGCTG
GTGGATCTGC GCGACGGCAA GGGCGAGATC GACGACATCG ACCATCTGGG CAACCGCCGC
GTGCGCTCGG TCGGCGAGCT CATGGAGAAC CAGTACCGTC TGGGCCTCCT GCGCATGGAG
CGTGCCATCA AGGAGCGCAT GTCGTCCGTC GACATCGACA CCGTGATGCC GCAGGACCTC
ATCAACGCGA AGCCCGCGGC GGCGGCGGTG CGCGAGTTCT TCGGCTCGTC GCAGCTCTCG
CAGTTCATGG ACCAGACCAA CCCGCTCTCC GAGGTGACGC ATAAGCGCCG CCTGTCGGCT
CTCGGCCCGG GCGGTCTGAC CCGCGAGCGC GCCGGCTTCG AGGTGCGCGA CGTGCATCCG
ACCCATTACG GCCGCATCTG CCCGATCGAG ACGCCGGAAG GCCCGAATAT CGGCCTCATC
AACTCGCTCG CCACCTTCGC GCGGGTGAAC AAGTACGGCT TCATCGAGAC CCCGTTCCGC
CGCGTGAAGA ACGGCGTCGT GACCGACGAG GTGGTCTACC TCTCGGCCAT GGAGGAGGCG
CGCTACTACG TGGCGCAGGC GAGCGCCGCG ATGGACGAGA ACCGCCGCCT GACGGAGGAT
CTCGTGGTCT GCCGCCGCGC CGGCGAGGTC ATCGTGGTCG CCCCCGACCG GGTCGACCTG
ATGGACGTGT CGCCCAAGCA GCTCGTGTCG GTCGCCGCGG CGCTGATCCC GTTCCTGGAG
AACGACGACG CCAACCGCGC CCTCATGGGC TCGAACATGC AGCGCCAAGC GGTGCCGCTG
GTGCGGGCCG ACGCGCCCTT CGTCGGCACC GGCATGGAGT CGGTGGTCGC CCGCGATTCG
GGCGCGGCCA TCGCGGCGCG GCGCAGCGGC ATCGTCGATC AGGTGGACGC CACCCGCATC
GTCATCCGCG CCACCGAGGA GACCGACCCG ACCAAGCCGG GCGTCGACAT CTACCGGCTG
CAGAAGTTCC AGCGCTCGAA CCAGTCGACC TGCATCACGC AGAAGCCGCT GGTGCGGGTG
GGCGAGCAGG TGGGCAAGGG CGACATCATC GCCGACGGTC CCTCGACCGA GTTCGGCGAG
CTGGCGCTCG GCCGCAACGT GCTCGTCGCG TTCATGCCGT GGAACGGCTA CAACTTCGAG
GATTCGATCC TGCTCTCCGA GCGGATCGTG AAGGATGACG TGTTCACCTC GATCCATATC
GAGGAGTTCG AGGTGATGGC CCGCGACACC AAGCTCGGGC CGGAGGAGAT CACCCGCGAC
ATCCCGAACG TCTCGGAGGA GGCGCTCAAG AACCTCGACG AGGCCGGCAT CGTCTATATC
GGGGCCGAGG TCCACGCGGG CGACATCCTG GTCGGCAAGA TCACGCCGAA GGGCGAGAGC
CCGATGACGC CGGAGGAGAA GCTGCTCCGC GCCATCTTCG GCGAGAAGGC GTCGGACGTC
CGCGACACCT CGCTGCGGGT GCCCCCGGGC GTCACCGGCA CCATCGTCGA GGTGCGGGTG
TTCAACCGGC ACGGGGTCGA CAAGGACGAG CGCGCCCAGG CCATCGAGCG CGAGGAGATC
GAGCGTCTCG CCAAGGACCG GGACGACGAA CAGGCGATCC TCGACCGCAA CACCTATGCG
CGTCTCGCCG ACGTGCTGGT GGGGCAGGCC CCGGTCGCCG GCCCGAAGGG GTTCAAGAAG
GACACGGTTC TCACCCGCGA GGGCCTGGCC GACTATCCCC GCTCGCAATG GTGGCAGTTC
GCGGTCGTCG ACGATCGTCT GATGACCGAG ATCGAGGCGA TGCAGAAGCA GTACGACGAG
TCGAAGAAGC GGCTGGAGCA GCGCTTCCTC GACAAGGTCG AGAAGCTGCA GCGCGGCGAC
GAATTGCCCC CCGGCGTCAT GAAGATGGTC AAGGTCTTCG TGGCGGTGAA GCGCAAGATC
CAGCCCGGCG ACAAGATGGC GGGCCGCCAC GGCAACAAGG GCGTGGTGTC CCGGATCGTG
CCGATCGAGG ACATGCCGTT CCTGGAGGAC GGCACGCATG CGGACATCGT GCTCAACCCG
CTCGGCGTGC CGAGCCGCAT GAATGTCGGC CAGATCCTCG AGACGCATCT CGGCTGGGCG
GCCGCGGGTC TCGGGCGCCA GGTGGCGCAG GCGGTGGATG CGTATCTGCG CAGCCATGAC
GCCACGCCGC TGCGCGAGCA GATGCGCAGG ATCTACAGCG AGGCGGAGCT CGACGGCCTG
TCCGACCAGG ACCTCGCCGA GATCGGCAAC AACCTGCGCC GCGGCGTGCC GATGGCGACG
CCGGTCTTCA ACGGCGCCAA GGAGGCCGAC ATCGAGGCGA TGCTGGAGAT GGCCGGGCTC
GACCGCTCGG GGCAGTCGAC GCTCTATGAC GGGCGCACCG GCGAGCCCTT CGACCGCAAG
GTCACGGTGG GCTACATCTA CATGCTGAAG CTGCACCATC TCGTGGACGA CAAGATCCAC
GCGCGCTCCA TCGGTCCCTA CTCCCTCGTC ACCCAGCAGC CGCTGGGCGG CAAGGCGCAG
TTCGGCGGCC AGCGCTTCGG CGAGATGGAG GTGTGGGCGC TCGAAGCCTA CGGGGCGGCC
TACACCCTGC AGGAGATGCT CACCGTCAAG TCGGACGACG TCGCCGGCCG CACCAAGGTC
TACGAAGCCA TCGTGCGCGG GGACGACACC TTCGAGGCGG GTATCCCCGA GAGCTTCAAC
GTGCTGGTGA AGGAGATGCG CTCGCTCGGG CTCAACGTCG AGCTGATCTC CTCCAAGCGC
GCGGCCAACG ACCAGCTCGA AGCGCCGCCG GAGGCTGCCG AGTAA
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| Protein sequence | MANTLVGRKR IRKFFGKIRE VAEMPNLIEV QKASYDQFLM VDEPEGGRPD EGLQSVFKSV
FPISDFSSTA LLEFVKYTFE APKYDVDECR QRGITFAAPL KVTLRLIVFD VDPDTGAKSV
KDIKEQDVYM GDMPLMTENG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAA
RIIPYRGSWL DVEFDAKDIV YARIDRKRKI PVTSLLFALG LDGEEILSTF YNRISYTRDG
ADWRVPYDAE RLKGFKASTD LIDADSGEVV LEAGKKLTAR SARQIAEKGV TALRATDEDL
IGQYIAEDMV NYKTGEIYAE AGDEISEKLL KGLADVGIEE IPVLDIDHVN VGPYIRNTLA
VDKNSNREGA LFDIYRVMRP GEPPTLDTAE AMFHSLFFDA ERYDLSAVGR VKMNMRLDLD
APDTMRTLRR DDMLAVVKAL VDLRDGKGEI DDIDHLGNRR VRSVGELMEN QYRLGLLRME
RAIKERMSSV DIDTVMPQDL INAKPAAAAV REFFGSSQLS QFMDQTNPLS EVTHKRRLSA
LGPGGLTRER AGFEVRDVHP THYGRICPIE TPEGPNIGLI NSLATFARVN KYGFIETPFR
RVKNGVVTDE VVYLSAMEEA RYYVAQASAA MDENRRLTED LVVCRRAGEV IVVAPDRVDL
MDVSPKQLVS VAAALIPFLE NDDANRALMG SNMQRQAVPL VRADAPFVGT GMESVVARDS
GAAIAARRSG IVDQVDATRI VIRATEETDP TKPGVDIYRL QKFQRSNQST CITQKPLVRV
GEQVGKGDII ADGPSTEFGE LALGRNVLVA FMPWNGYNFE DSILLSERIV KDDVFTSIHI
EEFEVMARDT KLGPEEITRD IPNVSEEALK NLDEAGIVYI GAEVHAGDIL VGKITPKGES
PMTPEEKLLR AIFGEKASDV RDTSLRVPPG VTGTIVEVRV FNRHGVDKDE RAQAIEREEI
ERLAKDRDDE QAILDRNTYA RLADVLVGQA PVAGPKGFKK DTVLTREGLA DYPRSQWWQF
AVVDDRLMTE IEAMQKQYDE SKKRLEQRFL DKVEKLQRGD ELPPGVMKMV KVFVAVKRKI
QPGDKMAGRH GNKGVVSRIV PIEDMPFLED GTHADIVLNP LGVPSRMNVG QILETHLGWA
AAGLGRQVAQ AVDAYLRSHD ATPLREQMRR IYSEAELDGL SDQDLAEIGN NLRRGVPMAT
PVFNGAKEAD IEAMLEMAGL DRSGQSTLYD GRTGEPFDRK VTVGYIYMLK LHHLVDDKIH
ARSIGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK SDDVAGRTKV
YEAIVRGDDT FEAGIPESFN VLVKEMRSLG LNVELISSKR AANDQLEAPP EAAE
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