Gene Mnod_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1875 
Symbol 
ID7305905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp1978455 
End bp1979384 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID643599610 
Producthistone deacetylase superfamily 
Protein accessionYP_002497168 
Protein GI220921867 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.184151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC TGTATCTCAG CCACCCGGCA TCCCTCGACC ACACCACGCC CCTCGGCCAT 
CCCGAACGCC CCGATCGCAT CCGGGTCATC GAGCAGGCGC TGGAGGATGA GCGGTTCTCC 
GCCCTGGTGC GCGAGCAGGC GCCGCGGGCG GAGCTCGCGG TCGCGACGCT CGCCCATCCG 
GAGGCCTATG TGGAGGCCAT CGCCGAGGCC GCGCCCCAGG CCGGCCTGGT GGCGATCGAT 
TCCGACACCG TGATGTCGCC CGGCACGCTC GAAGCGGTGC TGCGGTCGCT CGGGGCCGCC 
CGGCAGGCCG TCGACGAGGT GATGGCCGGC AAGGTCGCCA ACGCCTTCGC GGCCATGCGT 
CCGCCCGGCC ACCACGCCGA GCGGAGGCGG GCCATGGGCT TCTGCGTCTT CAACCAGGCG 
GCGGTCGCCG TCCGGCATGC CCAGAAGAGC TTCGGCGCGG AGCGCGTCGC CCTCGTGGAT 
TGGGACGTCC ATCACGGCAA CGGCTCGCAG GACATCTTCT GGAGCGACCG TTCGGTGCTG 
TACTGCTCGA CGCACCAGAT GCCGCTCTAC CCGGGCACGG GCGCCGCCTC CGAGCGGGGC 
GACCACGACA CGATCGTGAA CGTGCCCCTG CGCCCGGGCG ACGACGGCGA CCGCTTCCGC 
GAGGCATTCG AGCAGGGGAT CCTGCCGCGG GTCGATGCCT TCCACCCGGA CCTGATCGTG 
ATCTCGGCGG GCTTCGATGC CCATTGGCGC GATCCGCTGG CCAATCTCCA GCTCACGGAG 
GCGGATTTCG CCTGGGCGAC CCGCCGCCTC ATGGCGATCG CCGACCGGCG CGCGGGCGGT 
CGGGTCGTGT CGGTCCTGGA GGGCGGTTAC GACCTCGACG GATTGTCGAA GTCGGTCGCG 
GCCCATGTCG AGGCGCTGAT GGGACACTGA
 
Protein sequence
MTTLYLSHPA SLDHTTPLGH PERPDRIRVI EQALEDERFS ALVREQAPRA ELAVATLAHP 
EAYVEAIAEA APQAGLVAID SDTVMSPGTL EAVLRSLGAA RQAVDEVMAG KVANAFAAMR 
PPGHHAERRR AMGFCVFNQA AVAVRHAQKS FGAERVALVD WDVHHGNGSQ DIFWSDRSVL 
YCSTHQMPLY PGTGAASERG DHDTIVNVPL RPGDDGDRFR EAFEQGILPR VDAFHPDLIV 
ISAGFDAHWR DPLANLQLTE ADFAWATRRL MAIADRRAGG RVVSVLEGGY DLDGLSKSVA 
AHVEALMGH