Gene Mnod_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1762 
Symbol 
ID7302376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1857436 
End bp1858776 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID643599497 
ProductCarbohydrate-selective porin OprB 
Protein accessionYP_002497055 
Protein GI220921754 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.259805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCAGC CGGACACTTC CGCCAAGCCC TCGGCCAACC TCAACACCTC CATCGCCGAC 
CAGCTCGGGC CTGCGGGCGA TCCGGGCGGG TACCGCGCCT TCCTGAAATC CAAGGGCATC
GAGTACAGCC TCACCTATAT TGGCGAGGTG CTCGGCAATG CCACAGGCGG GGCGCGCCGC
GGCGCCATCG TCGAGGGCCG GCTCGACCTG CAGCTGGACA TCGACCTGGA CAGGCTCGCC
GGCTGGAGGG GCGCCAGCCT CCACGCCAAT GCCTACCAGA TCCACGGCAC CGGGCTGTCG
CGCTCCTACG CCGGCAACCT CATCACGGTG AGCGCCATCG AGGCGCTGCC GTCCTCGCGG
CTCTACGAAG CATGGTTCGA GCAGAAGCTG TTCGACGATC AGCTCGCCCT GCGCATCGGC
CAGCTCGCCG CCGACACCGA GTTCGCGGTC AGCCAGACCG GCACCCTGTT CATCAACTCG
ACCTTCGGCT GGCCGAACAT CATGGCGGCG ATCCTGCCGA GCGGCGGGCC GATCTACCCG
CTCGCGACGC CAGGTGCCCG CATCAAGTAC GTGCCCAGCA GGAACCTTTC ATTTCAGGCC
GGCATCTACA ACGGCGACCC GGCCGGGCCT GACCGCCTCG GCCTGGTGCC CGACCCGCAA
CGGCGCAACC ACACCGGCAC GAGCTTTCGG TTGACCGATC CGCCGCTGGT CATCGCCGAG
ATGTCCTACG CCTACAACAT CGAGAAGGGC GCCTCCGGCG AGCCCGGCAC CGTAACGCTC
GGCGGCTGGT ATCATGTCGG CCGCTTCAAC TCGCTCAGCC TCGACACTGC CGGACGCGCG
CTGGCGGATC CCGAGGCGAC GGGGAACGGT CGCCGCTTCC GGGGCAACAA CGGCCTCTAC
GGAATCATCG ACCAGACCAT CTACCGGGAG CCGGACGACC CGAACGACGG TGCCAGTATG
TTCCTGCGCC TCTCGGGCTC CCCGGGCGAT CGCAACCTGC TCGACGTCTA CGTGGATGCC
GGCATCGCCT ACAAAGGCCT GTTCCCGGGC CGCTCCGACG ACACGCTGGG CGTAGGCTTC
GCGCTCTCGC GCTTCTCTCC TGCGGCCCGA CGGGCGGATC TCGCTGCGAT CGCGCTCGCG
GGCGTCGCGC AGCCGCGGCG GAGCGCCGAG GCAGTGCTGG AGGCCACCTA CCAGGCCGTG
CTCGGCCCCG GCGTGACGCT CCAGCCCGAC TTCCAGTATG TGTTCAAGCC GAGTGGTGGC
GTGCTCAATC CGCGCTATCC GGAATTCGGG CGGGTGAAGA ACGCCGCCGT GTTCGGCCTG
CGGGCGACGA TCCGGTACTG A
 
Protein sequence
MAQPDTSAKP SANLNTSIAD QLGPAGDPGG YRAFLKSKGI EYSLTYIGEV LGNATGGARR 
GAIVEGRLDL QLDIDLDRLA GWRGASLHAN AYQIHGTGLS RSYAGNLITV SAIEALPSSR
LYEAWFEQKL FDDQLALRIG QLAADTEFAV SQTGTLFINS TFGWPNIMAA ILPSGGPIYP
LATPGARIKY VPSRNLSFQA GIYNGDPAGP DRLGLVPDPQ RRNHTGTSFR LTDPPLVIAE
MSYAYNIEKG ASGEPGTVTL GGWYHVGRFN SLSLDTAGRA LADPEATGNG RRFRGNNGLY
GIIDQTIYRE PDDPNDGASM FLRLSGSPGD RNLLDVYVDA GIAYKGLFPG RSDDTLGVGF
ALSRFSPAAR RADLAAIALA GVAQPRRSAE AVLEATYQAV LGPGVTLQPD FQYVFKPSGG
VLNPRYPEFG RVKNAAVFGL RATIRY