Gene Mnod_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1666 
Symbol 
ID7306283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1754855 
End bp1756045 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content76% 
IMG OID643599401 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002496959 
Protein GI220921658 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0854593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCC TCCGCCTGCT CGCCGGGCCG CTCGCCGCGC TGATCCTGCT GCCGCCCGCC 
GCCCGGGCGA GCCAGACCGA GGTGCCGGTG CCTGCCGTGA CGGTCGTGGT CGCGGCCGAG
CGCGAGATCG TGGAGCGCAC CGTCGTCACC GGCACCCTGG TGCCGCGCGA CGAGATCATG
GTCTCGCCCG AGATCGAGGG CTGCCGCATC ACCGAACTCC TGGTGGAGGA GGGCGACCGG
GTCGCCCGGG GCGCCGTGCT GGCACGGCTG TCGCGCGAGA TGCTGGACAC CCAACTCGCC
CAGAACGCTG CCGCGATCGC CCGGGCGGAG GCCGCGGTCG ATCAGGCGCG CAGCACCATC
GTGCAGGCCG AGGCCGCGCA GGTGGAGGCC GCCCTCGCGC TCGAGCGCAC CCGCACCCTG
ATGAAGTCCG GCAACGCCAC CGAGGCGCTG CTCGAGCAGC GCGTCTCGGC CGCCCGCTCG
GCGGAGGGGC GGCTGGCGGC GGCCCGCAAC GGCCTGTCGA TCGCGGAGGC CGAGCTGCTC
CAGGCCAAGG CCCAGCGCAA GGAACTCGAC CTCAAGCTCG CCCGCACCGA GATCCGCGCG
CCGGAGGGCG GCATCGTCAG CCGCCGCGTG GCGCGTGTCG GGGCGACGGC GAGCGCCTCC
GGCGAGCCGC TGTTCCGTCT GATCGCCCGC GGCGAGATCG AGCTCGAAGG CGAGGTGACC
GAGACCGGCA TCCCGCGGCT CAAGGCCGAG GCCCCGGCCC AGCTCGACCT CGACACGGCG
GACGGGCCGG TCGTGGTGCC GGGCCGCGTG CGCGCGGTCT ATCCGGAGAT CGACCGCGCA
ACGCGCCTCG GCAAGGTCCG CATCCGCCTG CAGCCCGATC CGCGCCTGCG CATCGGCGCC
TTCGCCCGCG GCAGCGTCGA GGTGGCGCGC CGCACCGGCG TCGCCGTGCC GGTCGCCTCG
GTGGTCTACG GCAATGGCGG CGCCACCGTG CTGGTGGTGG CGGGCGAACG GGTCGAGGTG
AGGGCGGTCC GCACCGGCCT CTCGGCCGCG GGCTTCATCG AGATCCGCGA CGGGGTGAAG
GCGGGCGATG CCGTGGTCGC CCGGGCGGGC AGCTTCCTGC GCGACGGGGA CCGGGTCCGG
CCGGTCTTTC CCGCCCAGCA GGCCAGCGCC GACGCCCTCC CGCGCCCCTG A
 
Protein sequence
MSRLRLLAGP LAALILLPPA ARASQTEVPV PAVTVVVAAE REIVERTVVT GTLVPRDEIM 
VSPEIEGCRI TELLVEEGDR VARGAVLARL SREMLDTQLA QNAAAIARAE AAVDQARSTI
VQAEAAQVEA ALALERTRTL MKSGNATEAL LEQRVSAARS AEGRLAAARN GLSIAEAELL
QAKAQRKELD LKLARTEIRA PEGGIVSRRV ARVGATASAS GEPLFRLIAR GEIELEGEVT
ETGIPRLKAE APAQLDLDTA DGPVVVPGRV RAVYPEIDRA TRLGKVRIRL QPDPRLRIGA
FARGSVEVAR RTGVAVPVAS VVYGNGGATV LVVAGERVEV RAVRTGLSAA GFIEIRDGVK
AGDAVVARAG SFLRDGDRVR PVFPAQQASA DALPRP