| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1646 |
|---|
| Symbol | |
|---|
| ID | 7303407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1735533 |
|---|
| End bp | 1736963 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643599380 |
|---|
| Product | homospermidine synthase |
|---|
| Protein accession | YP_002496939 |
|---|
| Protein GI | 220921638 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5310] Homospermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.322403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT GGCCCGTCCA CGGCCACATC AGCGGCCCCA TCGTGATGAT CGGCTTCGGG
TCGATCGGCC GGGGCACCCT TCCCCTGATC GAGCGCCACT TCACCTACGA CAAGAAGCGG
TTCACGGTCG TCGAGCCCTC CGACGAGCAC CGGGCGCTGG CCGAGAAGCA CGGCCTGCGC
TTCGAGCAGG TGGCGCTCAC CCGCGACAAT TACCGCGAGG TGCTCACCCC CCTCCTCACC
GAGGGCGGCG GCCAGGGCTT CTGCGTCAAC CTGTCGGTCG ACACCTCCTC GCGGGACATC
ATGGAGCTCT GCCGCGAGAT CGGCGCGCTC TACATCGACA CCGTCGCGGA GCCCTGGCCG
GGCTTCTACT TCGACAAGAG CGCCGGGCCG GGCGACCGCA CCAACTACGC CCTGCGCGAG
CAGATCCTGG AGGCGCGCCG CCGCAAGCCC GGCGGCACCA CCGCCGTGTC CTGCTGCGGC
GCCAATCCCG GCATGGTGTC GTGGTTCGTC AAGCAGGCCC TGCTCAACGT GGCGGGCGAC
CTCGGCCTGC GGGTCGCCGA GCCCAAGAGC CGCGAGGACT GGGCCGCGCT GATGCGGCAG
GCCGGCGTCA AGGGCATCCA CATCGCCGAG CGCGACACCC AGCGCGCCAA GTCCGAGAAG
CCGATGGGCG TGTTCGTCAA CACCTGGTCG GTCGAGGGCT TCGTGTCGGA GGGCAACCAG
CCGGCCGAGC TCGGCTGGGG CACGCACGAG ACCTGGATGC CGGAGAACGG CCGCACGCTC
GGCGCGGACG CCCTGGCGAT CTACCTGCTC CAGCCGGGCG CCGACACCCG GGTGCGCTCC
TGGACGCCGA CCGCCCAGGC GCAGTTCGGC TTCCTCGTCA CCCACAACGA GTCGATCTCG
ATCGCGGACT ATTTCACCGT CCGCGAGGGC GGTAAGCCGG TCTACCGCCC GACCTGCCAC
TATGCCTACC ATCCCTGCAA CGAGGCGGTG CTCTCCCTGC ACGAGATGTT CGGCCAGGCG
GCCCGCGTGC AGGAGAAGCA GCACATCCTC GACGAGAACG AGATCGTCGA CGGCATCGAC
GAACTCGGCG TGCTCCTCTA CGGCCACGGC AAGAACGCCT ACTGGTACGG CTCGCAGCTC
TCCATCGAGG AGACGCGCCG CATCGCCCCC TACCAGAACG CCACCGGCCT GCAGGTGACC
TCGGCCGTGC TCGCCGGCAT GGTCTGGGCG CTGGAGAACC CGGAGGCCGG CATCGTCGAG
GCCGACGAGA TCGATTTCCG CCGCTGCCTG GAGGTCCAGC TGCCGTATCT CGGCCCCGTG
GTGGGGGTCT ACACGGACTG GACGCCCCTC GCCAACCGTC CCGGGCTGTT CCCGGAGGAC
ATCGACGAGA GCGATCCCTG GCAGTTCCGC AACGTCCTGG TGCACAGCTG A
|
|---|
| Protein sequence | MTDWPVHGHI SGPIVMIGFG SIGRGTLPLI ERHFTYDKKR FTVVEPSDEH RALAEKHGLR
FEQVALTRDN YREVLTPLLT EGGGQGFCVN LSVDTSSRDI MELCREIGAL YIDTVAEPWP
GFYFDKSAGP GDRTNYALRE QILEARRRKP GGTTAVSCCG ANPGMVSWFV KQALLNVAGD
LGLRVAEPKS REDWAALMRQ AGVKGIHIAE RDTQRAKSEK PMGVFVNTWS VEGFVSEGNQ
PAELGWGTHE TWMPENGRTL GADALAIYLL QPGADTRVRS WTPTAQAQFG FLVTHNESIS
IADYFTVREG GKPVYRPTCH YAYHPCNEAV LSLHEMFGQA ARVQEKQHIL DENEIVDGID
ELGVLLYGHG KNAYWYGSQL SIEETRRIAP YQNATGLQVT SAVLAGMVWA LENPEAGIVE
ADEIDFRRCL EVQLPYLGPV VGVYTDWTPL ANRPGLFPED IDESDPWQFR NVLVHS
|
|---|
| |