| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1608 |
|---|
| Symbol | |
|---|
| ID | 7303369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1694533 |
|---|
| End bp | 1697646 |
|---|
| Gene Length | 3114 bp |
|---|
| Protein Length | 1037 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643599342 |
|---|
| Product | double-strand break repair protein AddB |
|---|
| Protein accession | YP_002496901 |
|---|
| Protein GI | 220921600 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3893] Inactivated superfamily I helicase |
|---|
| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.62778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG ACCGGATCTT CACCATCCCG CCCGGCGTGC CTTTCCTCGC CACGCTGGCG
GAGGCGCTCC TCGACGGGAC GCTCGCCGGG GATGTCGGGC GCGATCCGCT CGGGCTTGCG
ACGGTCACGC TCTACCTGCC GACGCGGCGG GCCACCCGGG CGCTTGCGGC GATCCTGGCC
GAGCGCTGCG GCCCGGCCGC GCTCCTGCCG CGCATGGTGC CCCTCGGGGA GGCCGACGAG
GCGGAGCTCG ACCTCGCGGC GGCCCCGTTC GGCGAGCGGC AGGAGGCGGT GCTGCATCCG
CCGATCCCGC CGCTCGAACG GCGGCTGATC CTCGCCCGTC TCGTCCAGGC CTGGGCAGCC
AGCATCGACC GCCAGCTCCT GCCGATGGAT GCGGAGGTGC CGTTCCGCGT GCCCTCCTCG
CCCGCCGACG CGGTCGGGCT CGCGGCCGAC CTCGAAGGGC TGATGGACGC GCTCACCGTC
GAGGGCCTGC CCTGGGACCA GATCGGCCAG GCGGTGGAGG CCGAGTATTC GCGCTACTTC
TCCCTCACCC TCGACTTCGT GCGGATCGCC GCCGAGCACT GGCCCGCGAT CCTGGCCGAG
CGGGGAGTGA GCGATCCGGT GGCGCGGGGC CGCGCCCTGG TGCTCGCCGA GGCCGCGCGC
CTGCGCCGGG AGCGCCCGGC CGACCCGATC GTCGTGGCGG GCTCGACCGG CTCGGTGCCG
GCGACGGCGG CCCTGATCGC CGCCATCGCG GCGATGCCGC GCGGCGCCGT GGTGCTGCCG
GGCCTCGACC TCGCCCTCGA CGAGGCGGGC TGGGCCGCCA TCGACACCGG CGAGGCCATC
GCCCATGGGC ATCCGCAGGC GGTGATGCAC CGGCTCCTCG GCCCCGGCGC CCTCGATTGC
GGCCGCGCCG CGGTGCGGCC CCTCGGCCGG CCGAGCCCGG AGGCGGAGGC GCGGGCGGCG
CTGCTGTCGC AGGCCCTGCG GCCGGCCGAG ACGACGGATG CCTGGGCGGA CCTCGATCCG
GGCCATCGCG TCTCCCTCGC CCGCGCGGGC GGGGCGGGGC TCGGCATCGT GGAGGCGGCG
GACGAGCGCG AGGAGGCGCT CGCCGTGGCG GCGGCCCTGC GCGAGACCCT GGAGCGCCCG
GGCCGCACCG CGGCGCTGAT CACGCCCGAC CGGACCCTGG CCCGCCGGGT GGCGGCGGAG
CTCAAGCGCT GGAACATCGT GGCGGACGAC ACGGCCGGGC AGCCGCTGGC GCTCTCCCCC
GCCGGCCGGC TCGCGCGGCT CGCCGCGGAC GTGGCCGCCC TCGTTGCCAA GCCCGACCGG
GTGCTGGCGC TCCTCGCCCA TCCGCTGGCG CGCCTGGGCT GCAGCCGGGC GGAGGTGGTG
CGGGCCGCCT CCGCCCTCGA GATCGGGGTC CTGCGCGGCC CTGCGCCGGG CAAGGGCTTC
GCGGGCCTTG CCGAGGCCCT GCGCGTCGCC CGCACGGAGG AGCGCCCGCA CGATCCTCGA
GCTCGCCGCC GCCTGACGGA GGCGGATTGG GACGCGGCGG CGGATCTGGT CGACCGGCTT
TCGGTCGCCT TCCGGGACTT TTTCGCTGAC GAGGACGATG CGGTGCGCGA TCTCGTCGGG
CTGGCGCGGG CCCACCGCAC CACCTGCGAT CTCCTGCTCG ACGGCCCCGA CGCCGTGGAG
GACGAGGCCT CGGTGGCCGT CCTCGACGGC CTGTTCGACG ATCTCGCGCT CGCCGAGACC
GGCCTGCTCG CCGGCCGGTT CTCGGATTAT CCGGCCTTCT TCACGGCGCT CGCCCGCGAG
CGGGTGGTGG CGGAGCGCCG GGCTTTGCCG CATCCGCGGC TGCGCATCCT CGGCCTCCTC
GAAGCGCGCC TGTTGTCGGT CGACCGCGTG GTGGTGGCGG GGCTCGACGA GGGCGTCTGG
CCGCCGAAGG CCGAGACGGA TGCCTTCCTC AACCGGCCGA TGCGCGGGGC GGTCGGCTTG
TCTCCGCCCG AGCGGCGCCT CGGCCAGACC GCCCACGATT TCGTGCAGGC GCTCGGCTGC
CCGGATGCGG TGATCACCCG CGCGCACAAG CGCGAGGGCT CGCCCATGGT GCCGTCGCGC
TTCCTGCAGC GGCTGCGCGC CTTCATGGGT GAGGAGGCCT GGAGCGCGCG GGTGCGGGCG
GGCGAGCGCT TCCGCGCGCT TGCGGCGGCC CTCGACCGCG GCACGGAGCC GCTGCCGCCG
CGCCTCGCGC GCCCGGCCCC AAAGCCCGAC CCGGCGCTTT TTCCGCGCAG CCTCAGCGTC
ACCGAGGTCG AGACGCTGGT GCGCGACCCC TACGCGATCT TCGCCCGCCA CGTGCTCGGC
CTCGATCCGC TGGAGCCGGT GGCGGTGCAG CCGAGCGCGA GCGACCGGGG CACGATCGTG
CACGATGTGC TCGGCGGCTT CGCGCAGCGT TTCCCCGAGG CCCTGCCGGC GGATCCGCTC
ACCCCGCTCC TCGACCTCGC GGTCAACGCC TTCGCGCCGA TCGCGGATGC CTATCCGGAA
CTCTATGCCG AGTGGTGGCC GCGCTTCGAG CGGATGGCGG GCGCCTTTCT CGCCTGGGAG
GCGGAGCGCC GCCCCGGCCT CGCGCGGGTT CATGCCGAGA CCTTCGGGCG CTGGCGGATC
CCGATCGGTC CGGCCGAGGA CTTCACCTTA CGCGCCCGCG CCGACCGGAT CGAGGTGACG
CGCGGCGGCG GCCATGTGAT CGTCGACTTC AAGACCGGCC AGCCGCCGAG CGCCAAAGAG
GTCTTCGCCG GGTTCGCGCC GCAGCTGACG CTGGAAGCCG CGATGCTGCG GGCGGGCGGC
TTCCGGGACC TCGGCGCCGC GGCGGCGGTG CCGGACCTCC TCTACGTACG GGCGGGCGGC
GGCAAGGTGC CGCTCGACCC TGTTCCCCTG AAGCCGCCGC GGGGCGAGGA GCGTTCCGTC
GCCGATCTCG TTGACGAGCA TGCGCGCCGC TTCCAGGCCC TGATCGCCCG CTTCCTTCAG
GGTGAGGCCG CCTTCCTGTC CCGGCCCTAC CCGAAATACG CCAGGGCGTA TTCGGCCTAC
GACCATCTGG CGCGGGTGAA GGAATGGTCG CTGGTGGAGG GGGAGGGGGC GTAA
|
|---|
| Protein sequence | MSEDRIFTIP PGVPFLATLA EALLDGTLAG DVGRDPLGLA TVTLYLPTRR ATRALAAILA
ERCGPAALLP RMVPLGEADE AELDLAAAPF GERQEAVLHP PIPPLERRLI LARLVQAWAA
SIDRQLLPMD AEVPFRVPSS PADAVGLAAD LEGLMDALTV EGLPWDQIGQ AVEAEYSRYF
SLTLDFVRIA AEHWPAILAE RGVSDPVARG RALVLAEAAR LRRERPADPI VVAGSTGSVP
ATAALIAAIA AMPRGAVVLP GLDLALDEAG WAAIDTGEAI AHGHPQAVMH RLLGPGALDC
GRAAVRPLGR PSPEAEARAA LLSQALRPAE TTDAWADLDP GHRVSLARAG GAGLGIVEAA
DEREEALAVA AALRETLERP GRTAALITPD RTLARRVAAE LKRWNIVADD TAGQPLALSP
AGRLARLAAD VAALVAKPDR VLALLAHPLA RLGCSRAEVV RAASALEIGV LRGPAPGKGF
AGLAEALRVA RTEERPHDPR ARRRLTEADW DAAADLVDRL SVAFRDFFAD EDDAVRDLVG
LARAHRTTCD LLLDGPDAVE DEASVAVLDG LFDDLALAET GLLAGRFSDY PAFFTALARE
RVVAERRALP HPRLRILGLL EARLLSVDRV VVAGLDEGVW PPKAETDAFL NRPMRGAVGL
SPPERRLGQT AHDFVQALGC PDAVITRAHK REGSPMVPSR FLQRLRAFMG EEAWSARVRA
GERFRALAAA LDRGTEPLPP RLARPAPKPD PALFPRSLSV TEVETLVRDP YAIFARHVLG
LDPLEPVAVQ PSASDRGTIV HDVLGGFAQR FPEALPADPL TPLLDLAVNA FAPIADAYPE
LYAEWWPRFE RMAGAFLAWE AERRPGLARV HAETFGRWRI PIGPAEDFTL RARADRIEVT
RGGGHVIVDF KTGQPPSAKE VFAGFAPQLT LEAAMLRAGG FRDLGAAAAV PDLLYVRAGG
GKVPLDPVPL KPPRGEERSV ADLVDEHARR FQALIARFLQ GEAAFLSRPY PKYARAYSAY
DHLARVKEWS LVEGEGA
|
|---|
| |