Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1554 |
Symbol | |
ID | 7307632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 1639867 |
End bp | 1640607 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643599289 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002496849 |
Protein GI | 220921548 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.278171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCGATCCG ATATCCGCGG CCCGATCCCC GATGACGGGC CCCCCGGCGC GGTCCAGGCC GTCGCCGTCC ACATGGCGGT GAACGCTGCC CTGGACGGGC GTCCGGACCT GCCGCCATTC CTGCGCGACC ATCTGGGCAC GCATCTGCGG GCCTGTTACG CCGCGCTGCT GGCCGAGCCG CAGCCGGCGC TGCTCATCGA ACTCGTCGGC CGCCTTGAGG CCGCGCTGGC GGTCGTCCGC CCGGCCTTCT CCTTCCGCGA CGAACTCCTG GCGACCCTGC CGTCGCTGCG GGCTTTCGCC CTGTCGCTGA CCACCACCCT CTCCCAGGCC GACGATCTGG TACAGGAGAC GCTGCTGCGG GCCTGGCAGA ACCAGCACCG CTTCGAGGCC GGCACGAACC TCAAGGCCTG GCTGTTCACG ATCCTGCGCA ATCAGTTCTA CACGGTTGCG CGCAAGCGCC GCCGGGAGGT GGAGGATGTC GACGACGCGG CGGCGGGCCG GATGGTCGCC CTGCCGGACC AGGAGGACGG GATCGCGCTG CGCGAGGTCT GGGACCAGGT GGCGCGCCTG CCGCCGCTCC AGCGGGAGGC CCTGCTTCTC GTCGCGGTGC AGGGGCTGAC CTACGAGGCC GCCGCCCGGC TGATGAACTG CCAAGTCGGC ACGGTGAAGA GCCGGGTCAG CCGCGCCCGC ACGGCGCTGG TGGAAGCCCT CGGCGGCGCC GGAGCCTGTT TCGAGAGGTG A
|
Protein sequence | MRSDIRGPIP DDGPPGAVQA VAVHMAVNAA LDGRPDLPPF LRDHLGTHLR ACYAALLAEP QPALLIELVG RLEAALAVVR PAFSFRDELL ATLPSLRAFA LSLTTTLSQA DDLVQETLLR AWQNQHRFEA GTNLKAWLFT ILRNQFYTVA RKRRREVEDV DDAAAGRMVA LPDQEDGIAL REVWDQVARL PPLQREALLL VAVQGLTYEA AARLMNCQVG TVKSRVSRAR TALVEALGGA GACFER
|
| |