Gene Mnod_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1554 
Symbol 
ID7307632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1639867 
End bp1640607 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content72% 
IMG OID643599289 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002496849 
Protein GI220921548 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.278171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATCCG ATATCCGCGG CCCGATCCCC GATGACGGGC CCCCCGGCGC GGTCCAGGCC 
GTCGCCGTCC ACATGGCGGT GAACGCTGCC CTGGACGGGC GTCCGGACCT GCCGCCATTC
CTGCGCGACC ATCTGGGCAC GCATCTGCGG GCCTGTTACG CCGCGCTGCT GGCCGAGCCG
CAGCCGGCGC TGCTCATCGA ACTCGTCGGC CGCCTTGAGG CCGCGCTGGC GGTCGTCCGC
CCGGCCTTCT CCTTCCGCGA CGAACTCCTG GCGACCCTGC CGTCGCTGCG GGCTTTCGCC
CTGTCGCTGA CCACCACCCT CTCCCAGGCC GACGATCTGG TACAGGAGAC GCTGCTGCGG
GCCTGGCAGA ACCAGCACCG CTTCGAGGCC GGCACGAACC TCAAGGCCTG GCTGTTCACG
ATCCTGCGCA ATCAGTTCTA CACGGTTGCG CGCAAGCGCC GCCGGGAGGT GGAGGATGTC
GACGACGCGG CGGCGGGCCG GATGGTCGCC CTGCCGGACC AGGAGGACGG GATCGCGCTG
CGCGAGGTCT GGGACCAGGT GGCGCGCCTG CCGCCGCTCC AGCGGGAGGC CCTGCTTCTC
GTCGCGGTGC AGGGGCTGAC CTACGAGGCC GCCGCCCGGC TGATGAACTG CCAAGTCGGC
ACGGTGAAGA GCCGGGTCAG CCGCGCCCGC ACGGCGCTGG TGGAAGCCCT CGGCGGCGCC
GGAGCCTGTT TCGAGAGGTG A
 
Protein sequence
MRSDIRGPIP DDGPPGAVQA VAVHMAVNAA LDGRPDLPPF LRDHLGTHLR ACYAALLAEP 
QPALLIELVG RLEAALAVVR PAFSFRDELL ATLPSLRAFA LSLTTTLSQA DDLVQETLLR
AWQNQHRFEA GTNLKAWLFT ILRNQFYTVA RKRRREVEDV DDAAAGRMVA LPDQEDGIAL
REVWDQVARL PPLQREALLL VAVQGLTYEA AARLMNCQVG TVKSRVSRAR TALVEALGGA
GACFER