| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1518 |
|---|
| Symbol | |
|---|
| ID | 7307596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | - |
|---|
| Start bp | 1602157 |
|---|
| End bp | 1603365 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643599253 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002496813 |
|---|
| Protein GI | 220921512 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0691325 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGACA GCATCGAGGT CGGAACGCCC GCCTTCCGGC GCACCGCCTG GGCGCTCGCG
GCGGCCGGGT TCTCCACCTT CGCGGTGCTC TACGCGGTCC AGCCGCTGCT GCCGGTCTTC
GCCGAGGCGT TCGGCGTGGG CCCGGCGGCG AGCAGCCTGT CGCTGTCGCT CTCCACCGGC
CTCCTCGCCG TCGCGCTCCT GGTGGTCAGC CCCCTGTCCG AGGTCTGGGG GCGCAAGCCC
GTGATGGTGG TCTCGCTCTT CGCCTCGGCG CTCCTCACCC TCGTCGCTGC CGCGATGCCG
ACCTGGCACG GCTTCCTGGT GGTGCGGGCG CTCGCCGGCC TCGCCATGAG CGGGGTGCCG
GCCGTGGCGA TGGCCTATCT CAGCGAGGAG ATGCACGGGC GGGCCATCGG GCTCGCCATG
GGGCTCCTGA TCAGCGGCAA TTCCCTCGGC GGCATGACCG GGCGGCTCCT CAGCGGGGCG
CTCACCGACC TCGTCGGCTG GCGCGCCGCC CTCGCGGCGA TCGGGCTCCT CGCCCTCGCG
GCGGCCGTGG CCTTCCAGCG CAGCCTGCCG GCCTCGACCC GGTTCACGCC CCACCCGCTG
CCCTGGCGCG CGGTGCCGGG CAGCTTCCTG CACCATTTCC GCGATGCGGG CCTGCCCTGG
CTGTTCGCCG AGGCCTTCCT GCTCATGGGC GGCTTCGTCA CGCTCTACAA CTATATCGGC
TTCCGCCTGC TCGACCCGCC CTATTCCCTC AGCCAGACCG CCATCGCGGC GATCTTCGTC
GTCTACCTCG CGGGCACCGC CTCCTCGACC ATGGTCGGCC ATGCGGCGAG CCTGTTCGGG
CGGCGGCGGG TGCTGTGGCT CGCCATCCTG ACGGCGCTCG CCGGGATCGC GCTGACCCTC
GCCGAGTCCC TCGCCCTCAT CATCCTGGGG ATCGTCGTGG CGACGGTCGG GTTCTTCGGC
GCGCATTCGG TGGCGAGCAG CTGGGTCGGG CGCCGGGCCC TCACCGACCG GGCGCAGGCC
TCCTCCCTCT ATCTCTTCCT CTACTATCTC GGCTCCTCGG TGCTCGGCAC CGCGGGCGGC
TGGTTCTTCG CCCATGCGGG CTGGGCGGGC GTGGCGGGCT TCGTGGGCGC CCTCTACCTC
GTGGCGCTCG CCGCGGCGCT GCGGCTGTCG GTGCTGCCGC CCCTGCCGGA GGCGCCGCCA
TCCCCATGA
|
|---|
| Protein sequence | MQDSIEVGTP AFRRTAWALA AAGFSTFAVL YAVQPLLPVF AEAFGVGPAA SSLSLSLSTG
LLAVALLVVS PLSEVWGRKP VMVVSLFASA LLTLVAAAMP TWHGFLVVRA LAGLAMSGVP
AVAMAYLSEE MHGRAIGLAM GLLISGNSLG GMTGRLLSGA LTDLVGWRAA LAAIGLLALA
AAVAFQRSLP ASTRFTPHPL PWRAVPGSFL HHFRDAGLPW LFAEAFLLMG GFVTLYNYIG
FRLLDPPYSL SQTAIAAIFV VYLAGTASST MVGHAASLFG RRRVLWLAIL TALAGIALTL
AESLALIILG IVVATVGFFG AHSVASSWVG RRALTDRAQA SSLYLFLYYL GSSVLGTAGG
WFFAHAGWAG VAGFVGALYL VALAAALRLS VLPPLPEAPP SP
|
|---|
| |