| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1397 |
|---|
| Symbol | |
|---|
| ID | 7308149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1480946 |
|---|
| End bp | 1481953 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643599138 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_002496699 |
|---|
| Protein GI | 220921398 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCGC GCGCGACCCT GCAGGGACCC GATCAGCCGG GCCCCGGCCT CGCCCTGGCC
TTCCTGGTGG CCTTCGCCCT GCACGTGGGC GCCATCGGGG CGATCACGCT CTGGCGCAGT
GCCCCGCCGA CCTCCGGCGA GAACGAGATC ACCATCGACC TCGCCCCGAG CCTGGAGGCG
ATCGAGGTTC CGAACGACGC GAACGACACC ATCTCGACGC CGCCGCCCGC GGAGCTTCCG
GCCGAACAGA AGACGGCGGA GCCGCCGGCC GAGACCCGGA TGGCCGACAC GCCGCCCGAC
CTGCCGGAGG TCAAGCCGCA GGAGAGTCCG GTCGAGACGC CCCAGCCGAT GACCGAGGCC
GTGCCGCCGG AGGCCGTGGA GCCGAAGCCG GCGGAGGCGG TGCAGGCCGT CGAGCTGCCG
CCCGAGGATC AGGTCATCAC CTCGACGAAC GAGGCGGCGC CGCTGGCGCC CCCGCCGCCG
GCCGTCGTGG CCCGCCCGGT GGAGGAGCCC AAGCCCGAGC CGAAGCCGGT GCTGAAGCCG
GTCGAGAAGC CGAAGCCCAA GCCCGTCGAG CAGGTGCGCA AGCCCCCGCC GCCGAAGCCG
GTCCGCGAGG CGACCCGCGA GGCGGTGAAG CCGCGGGCGG CGGAGCGCTC GACCGAGCCC
GCGCGGCAGC GCCGGGCGGC GGCCACCGCC TCGCGTGCGA ATGCGGGCGG CAGCGCGGCG
GCGCCCTCCG CCAATCCGAA CGCCCTGCGG GCATGGGGCC AGCAGATCTC CGGCGCGATC
CGGGCGCGGG TGCGCAGCCC GGGCGCTGGC GGCGGAACGG TGACGATCCG CTTCACGGTG
GCCCGCTCGG GCCGCGTGAT GAGCGCCTCG CTCATCAGCA GCAGCGGCAA CAGCAGCCTC
GACGCGGCCG CGCTCGCCGC CGCCGCCCCT GGCAGCTCGC TCCCGCCCGC TCCCGCGGAC
GTGACCGTGG CGCAGCAGAG CTTTTCGGTC CCGCTCGCCT TCCGGTGA
|
|---|
| Protein sequence | MTPRATLQGP DQPGPGLALA FLVAFALHVG AIGAITLWRS APPTSGENEI TIDLAPSLEA
IEVPNDANDT ISTPPPAELP AEQKTAEPPA ETRMADTPPD LPEVKPQESP VETPQPMTEA
VPPEAVEPKP AEAVQAVELP PEDQVITSTN EAAPLAPPPP AVVARPVEEP KPEPKPVLKP
VEKPKPKPVE QVRKPPPPKP VREATREAVK PRAAERSTEP ARQRRAAATA SRANAGGSAA
APSANPNALR AWGQQISGAI RARVRSPGAG GGTVTIRFTV ARSGRVMSAS LISSSGNSSL
DAAALAAAAP GSSLPPAPAD VTVAQQSFSV PLAFR
|
|---|
| |