Gene Mnod_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1363 
Symbol 
ID7308115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1448094 
End bp1449344 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content75% 
IMG OID643599104 
Productputative RNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002496665 
Protein GI220921364 
COG category[K] Transcription 
COG ID[COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0825491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACC TCGACTGGAT GCACGGCGCG CTCGCCGCCG CCCGGCCGCG GGCGATGGGG 
GCGCTGCTGC GCTACTTCCG CGACCTCGAC ACCGCCGAGG AGGCCTTCCA GGAGGCCTGC
CTGAAGGCGC TCGGCCACTG GCCGCGGCAG GGCCCGCCGC GGGACCCGGC CGCATGGCTG
ATCCTGGTCG GGCGCAACGC TGCCCTCGAT GCCGGGCGGC GCAGCCGCCG CGAGGCGCCC
CTGCCGGAGG AGGCCGAGCT CTCCGACCTC GACGACGCGG AAGCGGCGCT GGCCGAGCGG
CTCGACGACG CGCATTACCG CGACGATATC CTGCGGCTCC TCTTCATCTG CTGCCATCCG
GACCTGCCGG CGACGCAGCA GATCGCGCTC GCGCTGCGCG TCGTCTCGGG GCTCAGCGTC
CGGCAGATCG CCCGCGCCTT CCTCGTCGGC GAGAGCGCCA TGGAGCAGCG CATCACCCGG
GCGAAGGCGC GGGTGGCGCA GAACCGGGTG CCCTTCGAGG CGCCGGGGCC GGCCGAGCGG
GCCGAGCGCC TCGCCGCCGT CGCCGCCATG CTCTACCTCG TCTTCAACGA GGGCTACTCG
GCCGACCGGG CGACGAGCCC GGCCCGGGCG CCGCTCTGCG ACGAGGCGAT CCGCCTCGGG
CGCCTGCTGC TCCGGTTATT TCCGGCCGAG CCCGAGATCA TGGGCCTCGT CGCCCTGATG
CTGCTCCAGC ACGCCCGCGC GGCGGCACGC TTCTCCGCCG CGGGCGAGAT CGTGCTCCTC
GACGACCAGG ACCGCAGCCT GTGGGATTCC CGGATGATCG CGGAGGGCGT CGCCCTCCTC
GACAAGGCGA TGCGGCACGC GAGCCCCGGC CCCTACCAGG TGCAGGCGGC CATCGCCGCC
CTGCATGCCC GCAGCCGGAA TGCGGCGGAG ACCGACTGGG CGCAGATCGA CCGGCTCTAT
GCGACCCTCG AGATCATGCT CGCCTCGCCG GTCGTCACCC TCAACCGGGC CGTGGCGGTG
GCGAAGCTCC GCGGGCCGGA GGCGGCGCTC GCGCTGATCG AGCCCCTGGC GCCGCGGCTG
TCCGGCTATT TCCACTTCTT CGGCGTGAGG GGCGCGCTGC TCCTGCGGCT CGGCCGCCGC
GACGAGGCGC GGGCCGCCTT CGACCGGGCG ATTGCGCTCG CCCACTCCCC TGCGGAGGCC
GCGCATATCC GCCAGCACCT CGACCGGCTG GAGGCGCAGG CGGGGGGATG A
 
Protein sequence
MTDLDWMHGA LAAARPRAMG ALLRYFRDLD TAEEAFQEAC LKALGHWPRQ GPPRDPAAWL 
ILVGRNAALD AGRRSRREAP LPEEAELSDL DDAEAALAER LDDAHYRDDI LRLLFICCHP
DLPATQQIAL ALRVVSGLSV RQIARAFLVG ESAMEQRITR AKARVAQNRV PFEAPGPAER
AERLAAVAAM LYLVFNEGYS ADRATSPARA PLCDEAIRLG RLLLRLFPAE PEIMGLVALM
LLQHARAAAR FSAAGEIVLL DDQDRSLWDS RMIAEGVALL DKAMRHASPG PYQVQAAIAA
LHARSRNAAE TDWAQIDRLY ATLEIMLASP VVTLNRAVAV AKLRGPEAAL ALIEPLAPRL
SGYFHFFGVR GALLLRLGRR DEARAAFDRA IALAHSPAEA AHIRQHLDRL EAQAGG