| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1344 |
|---|
| Symbol | |
|---|
| ID | 7308096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1429301 |
|---|
| End bp | 1430062 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643599085 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_002496646 |
|---|
| Protein GI | 220921345 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.271587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTCC AGGGCATCGC GGCCATCGTG ACGGGGGGCG GATCGGGCTT GGGGGCGGCG
ACGGGCCGCG CGCTCGCAGC GGCGGGCGCC AGGGTCGCGC TCCTCGACCT CAACGAGCAG
GCCGCTGCCG CGGTCGCAGG CGAGATCGGC GGGCTCGCGC TCGTCTGCGA CGTCTCGGAT
GCCGCGAGCG CCGAAGCGGC GGTCGCCCGC GCCGCACAGG CGCACGGCCC GGCCCGGATC
CTCGTCAACT GCGCGGGCGT GGCGACCGCC GGACGCATCG TCGGACGCAA CGGCCCCCTC
GACCTCTCGG CTTATGCCCG CGTGATCGAG ATCAACCTGA TCGGCACCTT CAACCTGATG
CGGCTCGTGG CGGCGGGAGC CCTCGCCCTC GATCCGCTGG AGGGCGGTGA GCGCGGCGTC
ATCGTCTCGA CGGCCTCGGT CGCGGCCTAC GAGGGCCAGA TCGGGCAGGC GGCCTACGCC
TCCTCGAAGG CGGGCATCGT CGGCCTGACC CTGCCGGCCG CGCGCGAATT CGCGCCCGCG
GGCATCCGGG TCTGCGCCAT CGCCCCGGGC CTGTTCGAGA CGCCGATGAT GAAGGGGCTG
CCGCAGGAGG TGCAGGATTC GCTCGGCGCC GCGGTGCCCT TCCCGCCGCG CCTCGGGCGG
CCGGAGGAAT ATGCCCGGCT CGTCATGGCG ATCATCGACA ACCCGATGCT GAACGGCGAG
GTCATCCGGC TCGACGGCGC GCTGCGCATG CAGGCGCGGT GA
|
|---|
| Protein sequence | MKVQGIAAIV TGGGSGLGAA TGRALAAAGA RVALLDLNEQ AAAAVAGEIG GLALVCDVSD
AASAEAAVAR AAQAHGPARI LVNCAGVATA GRIVGRNGPL DLSAYARVIE INLIGTFNLM
RLVAAGALAL DPLEGGERGV IVSTASVAAY EGQIGQAAYA SSKAGIVGLT LPAAREFAPA
GIRVCAIAPG LFETPMMKGL PQEVQDSLGA AVPFPPRLGR PEEYARLVMA IIDNPMLNGE
VIRLDGALRM QAR
|
|---|
| |