| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1278 |
|---|
| Symbol | |
|---|
| ID | 7308029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1353987 |
|---|
| End bp | 1354703 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643599020 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_002496582 |
|---|
| Protein GI | 220921281 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.256521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGCG AGATCGTCCT CGACACCGAG ACCACCGGAA CCGATGCGAA GACCGACCGG
CTGATCGAGA TCGGCGGCAT CGAGCTCCTC AACCACATCC CGACCGGGCG CGAGTTCCAC
CGCTACATCA ACCCGCAGCG CGCCGTCTCC CAGGGTGCCT TCGCGGTGCA CGGCCTCTCG
GACGCGTTCC TGGCCGACAA GCCGCTCTTC GCCGAGATCC TGCCGGACTT CCTCGATTTC
TGCGGCGATG CCACCTTCGT GATCCACAAC GCCGCCTTCG ACGTCGGCTT CCTCAACGCG
GAATATGCGC GGCTCGGCGA GACGGCGCCG CCCCCCATCG AGCTGTCGGC CGTGGTCGAC
ACCCTGGCGC TCGCCCGGCG CAAGCATCCG AATGCCGCCA ACAACCTCGA CGCGCTCTGC
GCCCGCTACG GCATCGATAA TTCGCGCCGC ACCAAGCACG GGGCGCTCCT CGACGCGCAG
ATCCTGGCCG AGGTCTATAT CGAGCTCCTC GGCGGCAAGC AGACGAGCCT CGGGCTGACC
CTCGAAGCGG CGAGCATCGT GCGGGTGACG CAGGAAGCCG GCCCGGTCGC GCACGGGCCG
CGCAGCGTGC GGAGCCGCCT GACGGATGCC GAGCGTACGG CGCATGCCGC CTTCACGGCG
AGCCTCGGCG CCAACGCGGT CTGGCGCGAC TACATCGGCG AGGAGACCGC CGGATAA
|
|---|
| Protein sequence | MLREIVLDTE TTGTDAKTDR LIEIGGIELL NHIPTGREFH RYINPQRAVS QGAFAVHGLS
DAFLADKPLF AEILPDFLDF CGDATFVIHN AAFDVGFLNA EYARLGETAP PPIELSAVVD
TLALARRKHP NAANNLDALC ARYGIDNSRR TKHGALLDAQ ILAEVYIELL GGKQTSLGLT
LEAASIVRVT QEAGPVAHGP RSVRSRLTDA ERTAHAAFTA SLGANAVWRD YIGEETAG
|
|---|
| |