Gene Mnod_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1256 
Symbol 
ID7308695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1332534 
End bp1333916 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID643598998 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_002496560 
Protein GI220921259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC GCTGGACCCC TTCGAGCTGG CGGCGGCTGC CGATCCAGCA GGTGCCCGAA 
TATCCGGATG CGGTGGCGCT GGAGGCGGTC GAACGTCAGC TCGAGAGCTT TCCGCCCCTC
GTTTTTGCCG GTGAGGCCCG CAAGCTGAAG AAGAGCCTCG CCAAGGTGGC GGCGGGCGAG
GCCTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG ACGAGCATTC GGCCGACAAC
ATCCGCGACT TCTTCCGCGT CTTCCTGCAG ATGGCGCTGG TGCTCACCTT CGCGGGCGGC
TCGCCCGTGG TGAAGGTCGG GCGCATCGCG GGCCAGTTCG CCAAGCCCCG CTCCTCGCCG
ACCGAGACCG TGAACGGCGT CGCCCTGCCG AGCTACCGGG GTGACATCGT CAACGGCATC
GGCTTCTCGG CGGAGGACCG GATCCCGGAT CCGAAGCGGC AGCTCGAGGC CTACCGGCAA
TCGGCCGCGA CGCTGAACCT GCTGCGCGCC TTCGCGAGCG GCGGCTATGC CAACCTGGAG
AACGCCCATC GGTGGATGCT GGGCTTCGTC AAGGACTCGC CCCAATCCTC GGCCTACGAG
GATCTGGCCC AGCGCATGAC CGAGACCCTC GACTTCATGC GGGCGATCGG CATCAACCCG
GAGACGCACC AGGAGGTGCG CCAGACCGAT TTCTACACGA GCCACGAGGC GCTGCTGCTC
GGCTACGAGC AGGCGCTCAC CCGGGTCGAT TCGACGAGCG GCGACTGGTA CGCCACCTCG
GGCCACATGC TGTGGATCGG CGACCGCACG CGGCAGGCGG ACCACGCCCA TATCGAATAC
GCGCGGGGCA TCCGGAACCC GATCGGCCTC AAATGCGGGC CGTCGCTGCA GCCGGACGAC
CTGATCCGGC TGATCGGGCT CCTCAACCCG GAGAACGAGC CGGGGCGCCT CACCCTCATC
TGCCGCTTCG GCGCCGACAA GGTGGGCGAC CACCTGCCGG GGCTGATCCG GGCGGTGGAG
CGCGAGGGCC GCAAGGTGGT GTGGTCGTGC GACCCGATGC ACGGCAACAC CATCACGGCG
AGCGGCTACA AGACCCGGCC CTTCGAGCGG GTGATGAAGG AGATCCAGGG CTTCTTCGAC
GTCCACCGGG CGGAGGGCAC CTATGCGGGC GGCATCCACC TGGAGATGAC GGGCAAGAAC
GTCACGGAAT GCACGGGCGG CGCGCGGGCG CTGACCGCCG AGGATCTGCA GGACCGCTAT
CACACCTACT GCGATCCGCG CCTCAACGCC GAGCAGGCGC TGGAGGTGGC TTTCCTGACC
GCCGATCTCG TCAAGCGCGA GTGCAGGGAG CGGGAGCGGC CGCGGATCGA GGCCGCCGAA
TAG
 
Protein sequence
MSERWTPSSW RRLPIQQVPE YPDAVALEAV ERQLESFPPL VFAGEARKLK KSLAKVAAGE 
AFLLQGGDCA ESFDEHSADN IRDFFRVFLQ MALVLTFAGG SPVVKVGRIA GQFAKPRSSP
TETVNGVALP SYRGDIVNGI GFSAEDRIPD PKRQLEAYRQ SAATLNLLRA FASGGYANLE
NAHRWMLGFV KDSPQSSAYE DLAQRMTETL DFMRAIGINP ETHQEVRQTD FYTSHEALLL
GYEQALTRVD STSGDWYATS GHMLWIGDRT RQADHAHIEY ARGIRNPIGL KCGPSLQPDD
LIRLIGLLNP ENEPGRLTLI CRFGADKVGD HLPGLIRAVE REGRKVVWSC DPMHGNTITA
SGYKTRPFER VMKEIQGFFD VHRAEGTYAG GIHLEMTGKN VTECTGGARA LTAEDLQDRY
HTYCDPRLNA EQALEVAFLT ADLVKRECRE RERPRIEAAE