| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1241 |
|---|
| Symbol | |
|---|
| ID | 7308680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1311909 |
|---|
| End bp | 1313129 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643598983 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002496545 |
|---|
| Protein GI | 220921244 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACC CCCCGCTCTC CCGCCGTGCC GTGGTCGGCG GGCTTGCCGC GGCCCCCTTC
GTCGTGCGGG CCGCGCGAGC GGCGGACGGG CCGGTGCGGA TCGGCGAACT GAACTCCTAC
GGGCGCATGG CGGCCTTCGC GGGTCCCTAC CGCAACGCCA TGCAGCTCGC TGAGGACAGC
ATCAACAAGG CCGGCGGCAT CAAGGCGCTC GGCGGGCGCC CGATCGAGCT CGTCTTCCGC
GACGACGGCT CGACGCCGGG CGACGCGGTG CGGGTGGCCG AGGAGCTGCT CACCCGCGAG
AATGTCGCCT TCCTGTGCGG CACCTTCCTG TCGAACGTGG GCCTCGCGGT GGCGGATCTC
GCCAACCAGC GCAAGGTGCT GTTCCTGGCG ACCGAGCCGC TCACCGACGC GCTCACCATG
GGCAGCGGCA ACCGCTACAC CTTCCGGGTG CGGCCCAACA CCTACATGCA GACGAAGATG
CTGGTCGAGG CCGTGAAGGG TCGCGGCATC AAGCGCTGGG CGATCGTCGC GCCGAACTAC
GAATACGGCC AGTCGGCGGC GGCGAATTTC AAGCGGCTGA TGGCGGCCGC GGTGCCGGGT
TTCGAGGTGG TGGCCGAGCA GTTCCCGGCC CTCGGCAAGA TCGATGCGGG CGCCACCGTC
GGCGCCCTGG CGCAGGCCAA GGCGGACGGG CTGTTCAACG TGCTGTTCGC CGCCGACCTC
ACGGCCTTCG TGCGCGAGGG CAACACCCGC GGCCTGTTCG AGAAGCGGAT TGTCGCGAGC
CTGCTCACCG GCGAGCCGGA ATACATGATC CCGCTGGGCG ACGAGACGCC CGAGGGCTGG
ATCACCACCG GTTATCCGTG GGAGAGCATC GACACGCCCG GCCACAAGGC CTTCGTGGCG
GCCTACCGGG CCCGCTTCAA CGACACGCCG CGGCTCGGCT CGCTTCTCGG CTACGTGGTG
GTGCACATGA TCCGCGACCT GCTCGAGACG GCGAAGTCCA CCGAGACCGA GGCGATGATC
GCCGCCCTCG AAGGGCTCAC CTCCGAGACC ATCGCCGGCA AGGTCACCAT GCGCGCCCTC
GACCATCAGT CGACGCTCGG CGCCTGGATC GGCGAGACGG CCCTCGACGG CCGCAGGGGC
ACGATGCGCA ACGCCCGCTA CGCGGACGGC GCCGACTACA TGTTCCCGGA AGCGGAGGTG
AAGGCCGCCC GCAAGGCGTG A
|
|---|
| Protein sequence | MSHPPLSRRA VVGGLAAAPF VVRAARAADG PVRIGELNSY GRMAAFAGPY RNAMQLAEDS
INKAGGIKAL GGRPIELVFR DDGSTPGDAV RVAEELLTRE NVAFLCGTFL SNVGLAVADL
ANQRKVLFLA TEPLTDALTM GSGNRYTFRV RPNTYMQTKM LVEAVKGRGI KRWAIVAPNY
EYGQSAAANF KRLMAAAVPG FEVVAEQFPA LGKIDAGATV GALAQAKADG LFNVLFAADL
TAFVREGNTR GLFEKRIVAS LLTGEPEYMI PLGDETPEGW ITTGYPWESI DTPGHKAFVA
AYRARFNDTP RLGSLLGYVV VHMIRDLLET AKSTETEAMI AALEGLTSET IAGKVTMRAL
DHQSTLGAWI GETALDGRRG TMRNARYADG ADYMFPEAEV KAARKA
|
|---|
| |