Gene Mnod_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1217 
Symbol 
ID7308657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1288965 
End bp1289705 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID643598963 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002496525 
Protein GI220921224 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCCTGT CCCCTGACGC CTTGGCGGTC CCCGAATCGG CCGACAGCGC CGTCCTGCCC 
GAGCCGGTGC GCGATCATCT CGGGCAGGCG CTGCGGGATC TCTACGCGGC TCATCAGGCC
CGCGACCTGT CGCCCTCGCT CGAAGCGCTC CTCGACCGGC TCACCCGTGC CCTGGAGGCG
CAGTCGGACG CGGATCTCCG CGCCTTCCAT GCCGGCCTTC TGAAGGCGCT TCCCTCGCTG
CGCGCCTTCG CGATCAGCAT GGCCGGACGC GGCGCAGAGG CGGACGACCT CGTGCAGGAG
ACGGTGCTGC GCGCGTGGCA GAACCGCGAC CGGTTCACGC CCGGCACCAA TCTCGACGCG
TGGCTGTTCA CGATCATGCG CAACCACTTC TACTCGCTGC GCCGCAAGCG CTCGCGCGAG
GTGGAGGACG ACGAGGGGCA ATACGCGGCG CTGCTCGCCG TGGCGCCGCG CCAGGATCAC
GGCGTGAGCC TCGTCGAGGT CCAGCAGGCG CTCGCCCGCC TTCCGCCGGA CATGCGCGAG
ACCCTCGTGC TGGTGGGGGT GCAGGAACTC ACCTACGAGC AGGTCGCGAC GATGCTGGGC
GTGGCGGTCG GCACCATCAA GAGCCGGGTG AACCGCGCCC GCGCGCGGCT CGCTACGCTG
CTCGGCTACA CGGGCTGCGA ACTCCAGGCC GATGCCCTGA TCCAGTCCGC CCTGTCGAAC
CGTGTCGCGC CGCGCAGCTG A
 
Protein sequence
MLLSPDALAV PESADSAVLP EPVRDHLGQA LRDLYAAHQA RDLSPSLEAL LDRLTRALEA 
QSDADLRAFH AGLLKALPSL RAFAISMAGR GAEADDLVQE TVLRAWQNRD RFTPGTNLDA
WLFTIMRNHF YSLRRKRSRE VEDDEGQYAA LLAVAPRQDH GVSLVEVQQA LARLPPDMRE
TLVLVGVQEL TYEQVATMLG VAVGTIKSRV NRARARLATL LGYTGCELQA DALIQSALSN
RVAPRS