Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1212 |
Symbol | |
ID | 7308652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1283631 |
End bp | 1284827 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643598958 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002496520 |
Protein GI | 220921219 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.787629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCGA TCCGGACCGA TGCCATCTGC CGCCTCGGCG CGCTGCTCCT CGGCGCCACG GCGCTGGCCG GCCCGGCGGC CGCGCAGCAG CCGGGCGAGG ACGGCAAGCT CCGGGTCGGC CTGATGTTCA CCCTGAGCGG CCCCTCGGCC GTGCTGGGCG AGCAGGGGCG CGACGGCTTC CTCCTCGCGC TGGAGACGCT GGGCAGGAAG CTCGGCGGCC TCGACGCCGA GGTCGTGGTG GTCGACGACG AGCTGAAGCC CGATGTCGCC GCCAACAAGG CCCGGGAGCT GGTGAAGCGC GACCGCGTGG ATGTCGTGGT CGGGCCGACC TACTCCAACG TGCTGCGGGC GATCGTGCGG CCGGTGACGG AATCGGGCGC CTTCCTGATC AGCCCCAATG CCGGTACCTC GAACTACGCC GGGGCGGAGT GCAACCCGAA CCTGTTCGTT TCCTCCTACC AGAACGATCA GGTGCACGAG GTCCTGGGCA AATATGCGCA GAACAAGGGC TACAAGCGTC TCGTCCTGCT GGCGCCGAAC TACCAGGCGG GCAAGGACTC GCTTGCCGGC TTCAAGCGCT CCTACAAGGG CGAGGTGGTG AACGAGATGT TCACCCCGCT CGGCCAGCTC GACTTCTCGG CGGAGCTGGC GCAGATCGCC GCCGCCCAGC CCGACGCGGT CTTCGCCTTC ATGCCGGGCG GCATGGGCGT CAACCTCGTG CGGCAATACC GGCAGGCGGG CCTCGCCGGC ATCCCGTTCC TCTCCGCCTT CACGGTGGAC GAGACCACGC TGCCGGCCCA GAAGGACGCG GCGGTCGGCT TCTTCGGCGG CGCCAACTGG GCGCCCAACC TCGACAATCC GCAATCGAAG GCCTTCGTGG CCGCCTACGA GAAGAAATAC GGCAGCGTGC CGGGCACCTA CGCCATGCAG GCCTACGACG CCGCCCTGAT GATCGACAGC GCCGTCAAGG CCGCCAAGGG CAACCTGAAG GACAGGGACG CGATCCGGGC CGGCCTCAAG GCCGCCGACT TCACCTCCCT GCGCGGCTCC TTCAAGATCG GCAACAACCA CTTCCCAATC CAGGACTTCT ATCTCGTCAA GGCCGCCAAG CGCCCGGACG GCAAGTACGA GACCCAGATC GCGGAGAAGA TTTTTTCGAA CTATCAGGAT TCCTACGCCG CCCAGTGCAG GATGTGA
|
Protein sequence | MKPIRTDAIC RLGALLLGAT ALAGPAAAQQ PGEDGKLRVG LMFTLSGPSA VLGEQGRDGF LLALETLGRK LGGLDAEVVV VDDELKPDVA ANKARELVKR DRVDVVVGPT YSNVLRAIVR PVTESGAFLI SPNAGTSNYA GAECNPNLFV SSYQNDQVHE VLGKYAQNKG YKRLVLLAPN YQAGKDSLAG FKRSYKGEVV NEMFTPLGQL DFSAELAQIA AAQPDAVFAF MPGGMGVNLV RQYRQAGLAG IPFLSAFTVD ETTLPAQKDA AVGFFGGANW APNLDNPQSK AFVAAYEKKY GSVPGTYAMQ AYDAALMIDS AVKAAKGNLK DRDAIRAGLK AADFTSLRGS FKIGNNHFPI QDFYLVKAAK RPDGKYETQI AEKIFSNYQD SYAAQCRM
|
| |