Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1144 |
Symbol | |
ID | 7304456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1207527 |
End bp | 1209065 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643598891 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_002496453 |
Protein GI | 220921152 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.260838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGATTGT TGCAACGGCT CGAAATGCGT CAGGGCCAGG CCCTGGTGAT GACGCCGCAG CTCCTGCAGG CGATCAAGCT CCTGCAGCTC TCCCATCTCG ATCTTGCGGC CTATGTGGAT GCGGAGCTGG AGCGAAATCC TCTCCTGGAG CGCGCGGAGG CCGAGGAGGG GCGCGGCGAG CCGGCGGAGG CGGCGCCCGA GAGCTTCGAC GGCGAAGGCG GGTTCGACGG CGAGGCGGCC GAGCCCTGGC TCGCCCAGGA TCTCAACCCG AGCCGCGGCG AGATCGAGAG CGACCTCGGC ACCCGTCTGG ACAACGTCTT CCCCGATGAC GGCCCGGCCG CCCGCGAGGC GCCGGGCGGC GACAGCCTCT CTCTCACCCC GGCGCCTTGG GGCAATACGG GCGGCAGCTT CGACGGCGAG GCGCCGGATT TCGAGGCGAC GCTCACCAGC GAATCCACCC TGCGCGAGCA TCTTGCGGCC CAGCTCGACC TCGCGACCCG CGATCCCGTG GAGCGCCTGA TCGGCGGCTT CCTGATCGAT GCCGTCGACG AGGCCGGCTA CCTGCGCGAG GACCTCGCGG AACTCGCCGA GCGGCTCGGC GTCCGCACGG AGGTGGTCGC GCGCGTGCTG AGCCTGGTGC AGGGCTTCGA CCCGTCCGGC GTCTGCGCCC GCGATCTCGC CGAGTGCCTC AGCATTCAGC TGAAGGAGCG CGATCGATTC GATCCCGCCA TGCAGGCGCT GGTCTCCCGG CTCGACCTCG TGGCGAAGCG CGACCTCGCG GCCCTGCGCC GCCTCTGCGG GGTCGACGAC GAGGATCTCG CCGAGATGCT GGCGGAGCTG CGCCAGCTCG ATCCCAAGCC CGGCCGGGCC TTCGGCGCCG GTCCGGTCGA GGTGCTGGTG CCCGACGTCT TCGTGCGGCC GGCCCCGGAC GGGTCCTGGC TCGTGGAGCT CAACAGCGAG GCGTTGCCGC GCGTCCTCGT CAACCAGAGC TACTATGCGA CCGTCTCCCG CGGCGCGAAG AGCGACACCG ACAAGGCCTT CCTGTCGGAT TGCCTCCAGA CCGCCAACTG GCTCACCCGC AGCCTGGAGC AGCGCGCCCG CACCATCCTG AAGGTGGCGA GCGAGATCGT GCGCCAGCAG GACGGGTTCT TCCTCAACGG CGTGGCGCAT CTGCGCCCGC TCAACCTGAA GACGGTGGCC GACGCGATCG GCATGCACGA ATCGACGGTC TCGCGCGTGA CCTCGAACAA GTCGATCGGC ACGAGCCGCG GCACCTTCGA GATGAAGTAT TTCTTCACCG CGGCGATTCC GGGCGCGGCG GGCGCGGCGG CCCATTCCTC GGAGGCCGTG CGCCACCGCA TCAAGCAGCT GATCGATGCG GAGGCGGACG ACGTGCTGTC GGACGACGCG CTGGTGCAGC GCCTGCGCGG CGAGGGCGTC GACATCGCCC GCCGCACGGT GGCGAAGTAC CGCGAGTCGC TGCGCATCCC CTCCTCGATC GAGCGCCGCC GCGAGCGGGC GGCGATGGCG GTGCGGTGA
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Protein sequence | MGLLQRLEMR QGQALVMTPQ LLQAIKLLQL SHLDLAAYVD AELERNPLLE RAEAEEGRGE PAEAAPESFD GEGGFDGEAA EPWLAQDLNP SRGEIESDLG TRLDNVFPDD GPAAREAPGG DSLSLTPAPW GNTGGSFDGE APDFEATLTS ESTLREHLAA QLDLATRDPV ERLIGGFLID AVDEAGYLRE DLAELAERLG VRTEVVARVL SLVQGFDPSG VCARDLAECL SIQLKERDRF DPAMQALVSR LDLVAKRDLA ALRRLCGVDD EDLAEMLAEL RQLDPKPGRA FGAGPVEVLV PDVFVRPAPD GSWLVELNSE ALPRVLVNQS YYATVSRGAK SDTDKAFLSD CLQTANWLTR SLEQRARTIL KVASEIVRQQ DGFFLNGVAH LRPLNLKTVA DAIGMHESTV SRVTSNKSIG TSRGTFEMKY FFTAAIPGAA GAAAHSSEAV RHRIKQLIDA EADDVLSDDA LVQRLRGEGV DIARRTVAKY RESLRIPSSI ERRRERAAMA VR
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