| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1123 |
|---|
| Symbol | |
|---|
| ID | 7304435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011894 |
|---|
| Strand | + |
|---|
| Start bp | 1188700 |
|---|
| End bp | 1189662 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643598870 |
|---|
| Product | malate dehydrogenase, NAD-dependent |
|---|
| Protein accession | YP_002496432 |
|---|
| Protein GI | 220921131 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.117995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA AGAAGATCGC GCTGATCGGC GCCGGACAGA TCGGTGGCAC CCTCGCGCAC
CTCGCCGGTC TCAAGGAACT CGGCGACGTC GTGCTGTTCG ACATCGCCGA CGGCGTGCCG
CAGGGCAAGG GCCTCGACAT CGCCGAATCC GCTCCGGTCG ACGGCTTCGA CGCCAAGTAC
AGCGGCGCCA GCGACTACAG CGCCATCGCG GGCGCCGACG TGGTGATCGT GACGGCCGGC
GTGCCGCGCA AGCCCGGGAT GAGCCGCGAC GACCTGATCG GCATCAACCT GAAGGTGATG
GAAGCGGTCG GCACCGGCAT CAAGACCCAT GCCCCGAACG CCTTCGTGAT CTGCATCACC
AACCCGCTCG ACGCCATGGT CTGGGCGCTG CAGAAGTTCT CCGGTCTCGA CCCGAAGAAG
ATCGTCGGCA TGGCCGGCGT GCTCGACTCG GCCCGCTTCC GCCACTTCCT GGCGGAGGAG
TTCAGCGTCT CGGTCGAGGA CGTCACCGCC TTCGTGCTCG GCGGCCACGG CGACGACATG
GTGCCGCTCG TGCGCTACTC GACGGTGGCC GGCATCCCGC TCCCCGACCT CGTCAAGATG
GGCTGGACCA CCCAGGAAAA GCTCGACGCC ATGGTCGAGC GCACCCGTAA AGGGGGCGGC
GAGATCGTCA ACCTGCTCAA GACCGGCTCG GCCTTCTACG CGCCGGCGGC CTCCGCCATC
GCCATGGCCG AGAGCTACCT GAAGGACAAG AAGCGGGTGC TGCCCTGCGC GGCCTACCTC
ACCGGCCAGT ACGGCGTCGA CGGCCTGTTC ATCGGCGTGC CGATCGTGAT CGGGGAGAAC
GGCGTCGAGC GCATCGTCGA GGTCGCGTTC TCGGCCGAGG AGAAGGCGAT GTTCGACAAG
TCGGTCAATT CGGTGAAGGG CCTCGTCGAG GCCTGCAAGG GAATCAACGC GGCGCTCGCC
TGA
|
|---|
| Protein sequence | MARKKIALIG AGQIGGTLAH LAGLKELGDV VLFDIADGVP QGKGLDIAES APVDGFDAKY
SGASDYSAIA GADVVIVTAG VPRKPGMSRD DLIGINLKVM EAVGTGIKTH APNAFVICIT
NPLDAMVWAL QKFSGLDPKK IVGMAGVLDS ARFRHFLAEE FSVSVEDVTA FVLGGHGDDM
VPLVRYSTVA GIPLPDLVKM GWTTQEKLDA MVERTRKGGG EIVNLLKTGS AFYAPAASAI
AMAESYLKDK KRVLPCAAYL TGQYGVDGLF IGVPIVIGEN GVERIVEVAF SAEEKAMFDK
SVNSVKGLVE ACKGINAALA
|
|---|
| |