Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1038 |
Symbol | |
ID | 7302582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1109901 |
End bp | 1111448 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643598787 |
Product | histidine ammonia-lyase |
Protein accession | YP_002496349 |
Protein GI | 220921048 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.116739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGCG TCGCGATCAC GCCGGGCTGC GTTCCGCTCT CCGGCTGGCG CGCCATCCTG GCCGGGGCCG CAATCCGGCT CGACGAAAGC TGCCGGCCCG CCATCGCGCG CGCGGCCGAG GCGGTGGCGG CGATCGTCAC CCGGGCCGAG CCCGTCTACG GGATCAATAC CGGGTTCGGG AAGCTCGCGA CGGTGCGGAT CGACGCCGCC GACCTCGCCA CGCTCCAGCG CAACATCGTG CTCTCGCACG CGGCCGGAAC CGGCGAGCCG ATGCCGGTTG CGGTCGCCCG GCTGATGATG GCGCTCAAGC TCGCGAGCCT CGGCCAGGGT GCCTCGGGGG TGCGGCCGGA GACGGTCGCC CTTCTCGAAG CGATGCTGGC GCGGGGCGTG ACCCCGCTCG TGCCGGCGCA GGGCTCGGTC GGCGCCTCGG GCGACCTCGC CCCCCTCGCC CATATGACGG CGGCGATGAT CGGCGTCGGC GCGTGCATCG ACGAAGCGGG CACGCGGATC CCGGCGGCCG AGGCCCTGTC CCGCGTGGGC CTGGAGCCGC TGACGCTCGG CCCGAAGGAG GGGCTCGCCC TCCTCAACGG CACGCAGTTC TCGACCGCCT ATGCGCTCGC GGGGCTGTTC GGGGCCGAGG ATCTGCTCCG GGCCGCCCTT GTCGCGGGGG CGCTGTCGGT CGATGCGGCG CGTGGCTCGG ACACGCCCTT CGACCCGCGC ATCCACGCGC TGCGCCGCCA CCGCGGCCAG ATCGAGACGG CGCGCGCCCT GCGGGACCTC CTCTCCGGCT CGGCGATCCG GGCCTCGCAC CTCGTCGGGG ACGAGCGGGT GCAGGATCCC TATTGCCTGC GCTGCCAGCC CCAGGTGATG GGGGCGGCCC TCGACCTGCT GCGGCAGGCG GCCGCGACCC TGGAGACGGA AGCCAACGGC GTCTCGGACA ATCCGCTCGT TTTCCCCGAG ACCGGCGAGG CCCTGTCGGG CGGCAATTTC CACGCCGAGC CGGTCGCCTT CGCGGCCGAC ATGATCGCGC TTGCCCTCTG CGAGATCGGC GCGCTGTCCG AGCGGCGCAT CGCGCTTCTC GTCGATCCGG CCCTGTCCTC GGGCCTGCCC GCCTTCCTGA CGCCCCGGCC GGGGCTGAAT TCGGGCTTCA TGATCCCGCA GGTCACGGCG GCGGCCCTCG TCTCGGAGAA CAAGCAGCGC GCCCATCCGG CGAGCGTCGA TTCGATCCCG ACCTCCGCCA ACCAGGAGGA CCACGTCTCG ATGGCGGCTC ATGGCGCGCG GCGCCTGCTG CCGATGGTCG AGAATGCGAT GGCGGTGATC GCCATCGAGC TGCTCGCCGC CGCGCAGGGC TGCGACTTCC TGGCGCCGCT GCGGTCGAGC GAGCCCCTGG AGCGGGTGCG CGCGCGCCTG CGCGCCGCCG TGCCGCGCCT CGACGAGGAC CGGTATTTTC ATCCCGACCT CGCTGCCGCC GCGGCCCTGG TGCGCGGCGG GGCCGTGGTG GAGGCGGCGG GCGTGGGCCT GCCGGGGGTG AGCGGGGGCG TCGCGTGA
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Protein sequence | MSSVAITPGC VPLSGWRAIL AGAAIRLDES CRPAIARAAE AVAAIVTRAE PVYGINTGFG KLATVRIDAA DLATLQRNIV LSHAAGTGEP MPVAVARLMM ALKLASLGQG ASGVRPETVA LLEAMLARGV TPLVPAQGSV GASGDLAPLA HMTAAMIGVG ACIDEAGTRI PAAEALSRVG LEPLTLGPKE GLALLNGTQF STAYALAGLF GAEDLLRAAL VAGALSVDAA RGSDTPFDPR IHALRRHRGQ IETARALRDL LSGSAIRASH LVGDERVQDP YCLRCQPQVM GAALDLLRQA AATLETEANG VSDNPLVFPE TGEALSGGNF HAEPVAFAAD MIALALCEIG ALSERRIALL VDPALSSGLP AFLTPRPGLN SGFMIPQVTA AALVSENKQR AHPASVDSIP TSANQEDHVS MAAHGARRLL PMVENAMAVI AIELLAAAQG CDFLAPLRSS EPLERVRARL RAAVPRLDED RYFHPDLAAA AALVRGGAVV EAAGVGLPGV SGGVA
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