Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1036 |
Symbol | |
ID | 7302580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | - |
Start bp | 1107162 |
End bp | 1108826 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643598785 |
Product | urocanate hydratase |
Protein accession | YP_002496347 |
Protein GI | 220921046 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0275392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCGCC TCGACAATGC CCGCATCGTC CGCGCTCCCC GCGGCCCCGC CCTCACGGCC AAGAGCTGGC TCACCGAGGC GCCCCTGCGG ATGCTGATGA ACAACCTCGA TCCGGATGTC GCGGAGCGGC CGGGCGACCT CGTCGTCTAT GGCGGCATCG GCCGGGCGGC GCGGGACTGG GCCAGCTTCG ACCGGATCGT CGCCGCGCTC AAGGACCTCG ACGAGGACCA GACGCTCCTC GTGCAGTCGG GTAAGCCGGT CGGAATCTTC CGCACCCATC CGGACGCGCC GCGGGTGCTG ATCGCCAATT CCAACCTCGT GCCGCACTGG GCGACCTGGG CCCATTTCCA CGAGCTCGAT CGCAAGGGCC TGATGATGTA CGGCCAGATG ACGGCCGGCT CCTGGATCTA CATCGGCAGC CAGGGCATCG TGCAGGGCAC CTACGAGACC TTCGTGGAGA TGGGCCGCCA GCATTACGGC GGCGACCTCG CGGGGCGCTG GATCCTGACC GCGGGCCTCG GGGGCATGGG CGGCGCGCAG CCGCTCGCCG CCACCATGGC CGGGGCCTCC TGCCTCGCCG TCGAGTGCCG GGCATCGAGC ATCGAGTTCC GCCTGCGCAC GGGCTATGTC GACGTCCAGG CCCGCGACCT CGACGAGGCG CTCGCCCTGA TCGACGAATC CTGCCGGGCG CGGGTGCCCC GCTCCGTGGC GCTCATCGGC AACGCCGCCG AGGTCTTCGC CGAGATCCAG CGCCGTGGCG TGCGGCCGGA TTGCGTCACC GACCAGACCT CCGCGCACGA CCCCGTCAAT GGCTACCTGC CCCGGGGCTG GAGCATCGCC GAGTGGGAGG CGCGGCGCGA GAGCGACCCG GACGGGGTCG CGGCGGCCGC CAAGCGCTCC ATGGCCGAGC AGGTGCGGGT GATGCTGGCC TTCCACCGGG CCGGCGTGCC GACCGTCGAT TACGGCAACA ACATCCGGCA GATGGCGCTG GAGGAAGGGG TGGCGGACGC CTTCGCCTTC CCGGGCTTCG TGCCGGCCTA TATCCGCCCG CTCTTCTGCC GCGGCGTCGG GCCGTTCCGC TGGTGCGCCC TCTCGGGCGA TCCGGAGGAC ATTTACCGCA CCGACGCCAA GGTGAAGCAG CTTCTGCCCG ACAATGCCCA CCTGCACCGC TGGCTCGACA TGGCCCGGGA CAAGATCCGG TTCCAGGGCC TGCCGGCGCG GATCTGCTGG GTGGGCCTGG GCGACCGCCA CCGGCTCGGC CTTGCCTTCA ACGCCATGGT GCGCAGCGGG GAGCTCAAGG CGCCGATCGT GATCGGGCGC GACCACCTCG ATTCCGGCTC CGTCGCCTCC CCCAACCGGG AGACGGAGGC GATGCGCGAC GGCTCGGACG CGGTCTCGGA CTGGCCGCTT CTCAACGCCC TCCTCAACAC CGCCTCGGGC GCCACCTGGG TGTCGCTCCA CCACGGCGGC GGGGTCGGGA TGGGCTTCTC GCAGCATGCC GGCATGGTGA TCGTCTGCGA CGGCAGCGAG GCCGCGGACC GGCGCCTGGA GCGGGTGCTG TGGAACGATC CGGCCACGGG CGTGATGCGC CACGCCGATG CCGGCTACCC GGAGGCGATC GCCTGTGCGC GGGAACAGGG GTTGGTCCTG CCGAGCCTGG GCTAG
|
Protein sequence | MTRLDNARIV RAPRGPALTA KSWLTEAPLR MLMNNLDPDV AERPGDLVVY GGIGRAARDW ASFDRIVAAL KDLDEDQTLL VQSGKPVGIF RTHPDAPRVL IANSNLVPHW ATWAHFHELD RKGLMMYGQM TAGSWIYIGS QGIVQGTYET FVEMGRQHYG GDLAGRWILT AGLGGMGGAQ PLAATMAGAS CLAVECRASS IEFRLRTGYV DVQARDLDEA LALIDESCRA RVPRSVALIG NAAEVFAEIQ RRGVRPDCVT DQTSAHDPVN GYLPRGWSIA EWEARRESDP DGVAAAAKRS MAEQVRVMLA FHRAGVPTVD YGNNIRQMAL EEGVADAFAF PGFVPAYIRP LFCRGVGPFR WCALSGDPED IYRTDAKVKQ LLPDNAHLHR WLDMARDKIR FQGLPARICW VGLGDRHRLG LAFNAMVRSG ELKAPIVIGR DHLDSGSVAS PNRETEAMRD GSDAVSDWPL LNALLNTASG ATWVSLHHGG GVGMGFSQHA GMVIVCDGSE AADRRLERVL WNDPATGVMR HADAGYPEAI ACAREQGLVL PSLG
|
| |