| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_1029 |
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| Symbol | trmE |
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| ID | 7302573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 1098475 |
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| End bp | 1099779 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643598778 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002496340 |
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| Protein GI | 220921039 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.111023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTGGACA CGATCTTTGC ACCGGCCTCG GGGTTCGGAC GGGCTGCCGT CGCGGTGGTG
CGGATCAGCG GCCCCGGGGC CGCGGCGGCT CTGGAGGCAC TGACGCGCCA GCCCCCTCCC
CCGCCGCGGC GCCTGTCGCT GCGGACGCTG GTCGCTCCCG GGAGCGGCGA GATTCTGGAT
CGGGCGCTCG TCGCCTGGAT GCCGGCTCCC GGCACCTTCA CGGGCGAGGA CAGTGTCGAG
CTCCAGCTCC ATGGCGGCCC GGCGGTGCGG GCGGCCGTGC TGCGGGCCCT GGCGCATCTG
CCCGGCCTCG CTCCCGCCGA GCCCGGCGCC TTCACGCGGC GGGCCTTCCT CAACGGCCGC
ATGGACCTCA CGGAGGTCGA GGGCCTCGCC GATCTGATCG ATGCCGAGAC GGAGGCACAG
CGGCGCCAGG CGATGCGCCA GCTCGACGGC GCCCTCAGCC GGCTGGTGGA GGATTGGCGC
GCCACGCTTC TCGACGTGCT GGCGATGACG GAAGCGGCGC TCGATTTTTC GGACGAGGGC
GACGTGGATG CGGAGACGCT CACGACGGCC GGGCTCGCGG CGGCTACTCG GGTCCGCGAC
GGGATCCTGT CGGCTCTGGC GAATGGACGC CGGGGAGAAC GGCTGCGCGA GGGTCTCATG
GTGGTGCTGG CGGGCGCGCC GAATGCAGGG AAATCGACCC TGCTCAATGC GCTGGCGCGG
CGCGACGCTG CCATCGTCTC GGCCATCCCC GGCACCACCC GCGACGCGAT CGAGGTGCGC
TGCGATCTCG GTGGTCTGCC GGTGATGCTG GTGGATACGG CGGGCCTGCG CGAGAGCGTG
GACGCGATCG AGGTCGAAGG GATGGCGCGC AGCCGAAGGC GGATCGCGGA TGCGGATCTC
GTGCTCTGGC TGGTGCCGCC GGAGGGCTCC GGCGAGACTC CGCCCGCTGG CGCGCTGGTG
GTCCGCACCA AGGCGGACCT CTCCTCCCCT TCTCCCGGGG ACGGTCTCGC GATCTCGGCG
CTCACCGGAC AGGGGCTCGA TGCCCTGCTC GACCGGATCG AGGTCTCCGC CCAGGCCGCC
CTCGGTCAGG GCGATGCCGT CGTCACGCGG GAGCGGCAGC GCCTCGCCCT GGAAAGCTGC
GCGGAGCATC TCGACCGCGC GATCGCCGGA GCCGCTTCGC TGCCGGCAGA ACTGGTGGCC
GAGGACCTTC GGCTGGCGGT GCGGGCGCTC GGCGAGGTGG CCGGACGGGT GGGTGTCGAG
GAGATGCTGG ACCGGCTGTT CGCGAGCTTC TGCATCGGCA AGTGA
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| Protein sequence | MVDTIFAPAS GFGRAAVAVV RISGPGAAAA LEALTRQPPP PPRRLSLRTL VAPGSGEILD
RALVAWMPAP GTFTGEDSVE LQLHGGPAVR AAVLRALAHL PGLAPAEPGA FTRRAFLNGR
MDLTEVEGLA DLIDAETEAQ RRQAMRQLDG ALSRLVEDWR ATLLDVLAMT EAALDFSDEG
DVDAETLTTA GLAAATRVRD GILSALANGR RGERLREGLM VVLAGAPNAG KSTLLNALAR
RDAAIVSAIP GTTRDAIEVR CDLGGLPVML VDTAGLRESV DAIEVEGMAR SRRRIADADL
VLWLVPPEGS GETPPAGALV VRTKADLSSP SPGDGLAISA LTGQGLDALL DRIEVSAQAA
LGQGDAVVTR ERQRLALESC AEHLDRAIAG AASLPAELVA EDLRLAVRAL GEVAGRVGVE
EMLDRLFASF CIGK
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