Gene Mnod_1024 details

Gene Information

• Locus tag: Mnod_1024
• Symbol: holA
• ID: 7302568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylobacterium nodulans ORS 2060
• Kingdom: Bacteria
• Replicon accession: NC_011894
• Strand: +
• Start bp: 1092807
• End bp: 1093835
• Gene Length: 1029 bp
• Protein Length: 342 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643598773
• Product: DNA polymerase III subunit delta
• Protein accession: YP_002496335
• Protein GI: 220921034
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCCG TCCGCCCCGG CGATATCGAG GGGCTGCTGC GGCGCGGCCC CGATCCGCGC 
ATCGCGGTGA TCCTGGTTTA TGGCCCCGAT ACGGGACTTG TGGCCGAGCG GGCACGGCGC 
CTCGCCGAGA GCGCCGTCGC AGACCCGTCC GACCCTTTCG CCCTGGTCAA GCTCGACGGC 
GACACGCTCG CGGGCGATCC CGGCCGGCTG GTGGACGAGG CCGGCACCGT CGGTCTGTTC 
GGCGGCCAGC GCGCAATCTG GGTCCGGCCC GGCAGCCGCA ATTATGCGCC GGCCGTCGAG 
GCGGTGCTCA AAGCCGAACT CGCCGCGACA CGCATCGTCG TCGAGGCCGG CGACCTCGCC 
AAGTCGGCGC CCCTGCGGGC CCTCTGCGAG CGGTCTCAGC GGGCACTCGC CCTCCCCTGC 
TATCCGGACG ATGCGCGGAC GTTGGCCGAG CTGATCGACA GCCGCTTGCA GGACGAGGGC 
CTGCGGATCG CCCGCGACGC CCGCGAGGTC TTCGTTGCCA GCCTCGGCGG CGACCGGAGG 
GCGAGTCTCG GCGAGATCGA GAAGCTCGCC CTCTATGCGC GGGGCCGGGG TGAGATCACG 
CTGGAGGATG TCGAGGCGAT CGCCAGCGAC GTCTCGGGAT CGGCGCTCAA TGCGCTGATC 
GATGCGGCCT TCGCCGGCCA GGCCGGCGAG ACGGAGCGCA GCTACCGCCG CTTCCAGACC 
GAGGGCATGG ACGCCTCGGT GATGCTGGGA GCGGGGTTGC GCCACGTCCT GACGCTGCTG 
ACGGTCCGGC TCGAAGGCGA CGGCAAGAGC CCGAGCCAGC TGGTGGCGAA TTGGCGCGGA 
TTGCATTTTC GCCGGCAAAA GATCGTCGAG ATCCAGCTCG CGCGCTGGTC GCCCGACGGG 
CTACGGCGGG CCGTGACACG GCTGCAGGAG GCGGTGTTGG CCTGCCGCCG GGCGGACGCC 
GATTTTGCGC ATAGCATCGC CAGCGACGTG TTTCTGCGCT TGGCCCTCGA AGCCAGCCGC 
CGCGCCTGA 

 

Protein sequence

MTAVRPGDIE GLLRRGPDPR IAVILVYGPD TGLVAERARR LAESAVADPS DPFALVKLDG 
DTLAGDPGRL VDEAGTVGLF GGQRAIWVRP GSRNYAPAVE AVLKAELAAT RIVVEAGDLA 
KSAPLRALCE RSQRALALPC YPDDARTLAE LIDSRLQDEG LRIARDAREV FVASLGGDRR 
ASLGEIEKLA LYARGRGEIT LEDVEAIASD VSGSALNALI DAAFAGQAGE TERSYRRFQT 
EGMDASVMLG AGLRHVLTLL TVRLEGDGKS PSQLVANWRG LHFRRQKIVE IQLARWSPDG 
LRRAVTRLQE AVLACRRADA DFAHSIASDV FLRLALEASR RA