Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_1001 |
Symbol | rho |
ID | 7302545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 1071497 |
End bp | 1072807 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643598751 |
Product | transcription termination factor Rho |
Protein accession | YP_002496313 |
Protein GI | 220921012 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATCGAAG ACACCATCGC ACCCATCGAG ACCTTCACGC CCCCGATGCG GGAGGTGAAG CTCCAGGACC TCAAATCGAA GACTCCCACC GAACTGATCG CCTTCGCCGA GGAGGTCGAG GTCGAGAACG CCTCGACCAT GCGCAAGCAG GAACTGATGT TCGCCATCCT GAAGCAGCTC GCTGCCAAGG ATGTGGAGAT CATCGGGGCC GGGACGGTCG AGGTGCTGCA GGACGGGTTT GGCTTCCTGC GCTCCTCCGA TTCCAACTAC CTGCCGGGCC CGGACGACAT CTACGTGTCG CCGACCCAGA TCCGCCGCTT CGGCCTGCGC ACCGGCGACA CCGTCGATGG CCCGATCCGG GGGCCGAAGG ATGGCGAGCG CTACTTCGCG CTGCTCAAGG TCAACACCAT CAACTTCGAG AACCCGGACA AGATCAAGCA CAAGGTCCAT TTCGACAACC TGACGCCGCT GTTCCCGACG CAGCGCTTCA AGCTCGAACT CAGCGAGCCG ACCCGCAAGG ACTACTCGCC GCGGGTCATC GACATCGTCT CGCCGATCGG CAAAGGCCAG CGCGCCCTGA TCGTGGCGCC GCCGCGCACC GGCAAGACGG TGCTGATGCA GAACATCGCC CAGTCGATCA CCATCAACCA CCCGGAATGC TACCTCATCG TGCTGCTCAT CGACGAGCGG CCCGAGGAGG TCACCGACAT GCAGCGCTCC GTGAAGGGCG AGGTGATCGC CTCCACCTTC GACGAGCCGG CGACCCGCCA CGTCCAGGTG GCCGAGATGG TGATCGAGAA GGCCAAGCGC CTCGTCGAGC ACGGCCGGGA CGTGGTGATC CTGCTCGATT CGATCACCCG CCTCGGGCGC GCCTACAACA CGGTCGTGCC CTCCTCCGGC AAGGTGCTGA CCGGCGGCGT CGACGCCAAC GCCCTGCAGC GGCCCAAGCG CTTCTTCGGC GCGGCCCGCA ACATCGAGGA GGGCGGCTCC CTCACCATCA TCGCGACCGC CCTCATCGAC ACCGGCTCGC GCATGGACGA GGTGATCTTC GAGGAGTTCA AGGGCACCGG CAATTCCGAG ATCATCCTGG ACCGCAAGGT CGCCGACAAG CGCACCTTCC CGGCCATCGA CATCACCCGC TCCGGCACCC GCAAGGAGGA GCTGCTGGTG CCGCCGGACA CGCTCAAGAA GACCTACGTG CTGCGCCGCA TCCTCAACCC GATGGGCGTC ACCGACGCGA TCGAGTTCCT CCTCGACAAG CTGCGGCAGA CGAAGAGCAA CGCGGATTTC TTCGATTCCA TGAACACCTG A
|
Protein sequence | MIEDTIAPIE TFTPPMREVK LQDLKSKTPT ELIAFAEEVE VENASTMRKQ ELMFAILKQL AAKDVEIIGA GTVEVLQDGF GFLRSSDSNY LPGPDDIYVS PTQIRRFGLR TGDTVDGPIR GPKDGERYFA LLKVNTINFE NPDKIKHKVH FDNLTPLFPT QRFKLELSEP TRKDYSPRVI DIVSPIGKGQ RALIVAPPRT GKTVLMQNIA QSITINHPEC YLIVLLIDER PEEVTDMQRS VKGEVIASTF DEPATRHVQV AEMVIEKAKR LVEHGRDVVI LLDSITRLGR AYNTVVPSSG KVLTGGVDAN ALQRPKRFFG AARNIEEGGS LTIIATALID TGSRMDEVIF EEFKGTGNSE IILDRKVADK RTFPAIDITR SGTRKEELLV PPDTLKKTYV LRRILNPMGV TDAIEFLLDK LRQTKSNADF FDSMNT
|
| |