Gene Mnod_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_1001 
Symbolrho 
ID7302545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1071497 
End bp1072807 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content65% 
IMG OID643598751 
Producttranscription termination factor Rho 
Protein accessionYP_002496313 
Protein GI220921012 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG ACACCATCGC ACCCATCGAG ACCTTCACGC CCCCGATGCG GGAGGTGAAG 
CTCCAGGACC TCAAATCGAA GACTCCCACC GAACTGATCG CCTTCGCCGA GGAGGTCGAG
GTCGAGAACG CCTCGACCAT GCGCAAGCAG GAACTGATGT TCGCCATCCT GAAGCAGCTC
GCTGCCAAGG ATGTGGAGAT CATCGGGGCC GGGACGGTCG AGGTGCTGCA GGACGGGTTT
GGCTTCCTGC GCTCCTCCGA TTCCAACTAC CTGCCGGGCC CGGACGACAT CTACGTGTCG
CCGACCCAGA TCCGCCGCTT CGGCCTGCGC ACCGGCGACA CCGTCGATGG CCCGATCCGG
GGGCCGAAGG ATGGCGAGCG CTACTTCGCG CTGCTCAAGG TCAACACCAT CAACTTCGAG
AACCCGGACA AGATCAAGCA CAAGGTCCAT TTCGACAACC TGACGCCGCT GTTCCCGACG
CAGCGCTTCA AGCTCGAACT CAGCGAGCCG ACCCGCAAGG ACTACTCGCC GCGGGTCATC
GACATCGTCT CGCCGATCGG CAAAGGCCAG CGCGCCCTGA TCGTGGCGCC GCCGCGCACC
GGCAAGACGG TGCTGATGCA GAACATCGCC CAGTCGATCA CCATCAACCA CCCGGAATGC
TACCTCATCG TGCTGCTCAT CGACGAGCGG CCCGAGGAGG TCACCGACAT GCAGCGCTCC
GTGAAGGGCG AGGTGATCGC CTCCACCTTC GACGAGCCGG CGACCCGCCA CGTCCAGGTG
GCCGAGATGG TGATCGAGAA GGCCAAGCGC CTCGTCGAGC ACGGCCGGGA CGTGGTGATC
CTGCTCGATT CGATCACCCG CCTCGGGCGC GCCTACAACA CGGTCGTGCC CTCCTCCGGC
AAGGTGCTGA CCGGCGGCGT CGACGCCAAC GCCCTGCAGC GGCCCAAGCG CTTCTTCGGC
GCGGCCCGCA ACATCGAGGA GGGCGGCTCC CTCACCATCA TCGCGACCGC CCTCATCGAC
ACCGGCTCGC GCATGGACGA GGTGATCTTC GAGGAGTTCA AGGGCACCGG CAATTCCGAG
ATCATCCTGG ACCGCAAGGT CGCCGACAAG CGCACCTTCC CGGCCATCGA CATCACCCGC
TCCGGCACCC GCAAGGAGGA GCTGCTGGTG CCGCCGGACA CGCTCAAGAA GACCTACGTG
CTGCGCCGCA TCCTCAACCC GATGGGCGTC ACCGACGCGA TCGAGTTCCT CCTCGACAAG
CTGCGGCAGA CGAAGAGCAA CGCGGATTTC TTCGATTCCA TGAACACCTG A
 
Protein sequence
MIEDTIAPIE TFTPPMREVK LQDLKSKTPT ELIAFAEEVE VENASTMRKQ ELMFAILKQL 
AAKDVEIIGA GTVEVLQDGF GFLRSSDSNY LPGPDDIYVS PTQIRRFGLR TGDTVDGPIR
GPKDGERYFA LLKVNTINFE NPDKIKHKVH FDNLTPLFPT QRFKLELSEP TRKDYSPRVI
DIVSPIGKGQ RALIVAPPRT GKTVLMQNIA QSITINHPEC YLIVLLIDER PEEVTDMQRS
VKGEVIASTF DEPATRHVQV AEMVIEKAKR LVEHGRDVVI LLDSITRLGR AYNTVVPSSG
KVLTGGVDAN ALQRPKRFFG AARNIEEGGS LTIIATALID TGSRMDEVIF EEFKGTGNSE
IILDRKVADK RTFPAIDITR SGTRKEELLV PPDTLKKTYV LRRILNPMGV TDAIEFLLDK
LRQTKSNADF FDSMNT