Gene Mnod_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0980 
Symbol 
ID7302523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp1052427 
End bp1053446 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID643598733 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002496296 
Protein GI220920995 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACGC AAGGAGGGAT CTCGCGCCGT GGGGTCACGG CCGGGCTGCT GGCGGCTGGC 
CTCATCGGGG GCGGGGCCTT ACCCGTCAGG GCGCAGCGGG CCAAGTACCG GCTGCGCTAC 
GGCACGGCCT TCCCGGCCGA TCATCCGGGC GCCGTCCGCA TCCGCGAGGC AGCCGAGGCG 
ATCGCCACGG CCACGAACGG CGAAGTCAAC CTCCAGGTCT ATCCGAACAG CCAGCTCGGC 
GGCGAGGCCG ACATGTTCTC GCAGGTGCGC TCCGGCGCCC TCGACTTCAT GTCGACCTCG 
GGCGTGAACC AGACCGTGCT CCCGGTCGGC GGCATCAACG CGGTCGCCTT CGCCTTCGAC 
GACTACGCCA AGGTCTGGGC CGCCATGGAC GGGGACCTCG GCGCCTATGT GCGGGCGCAA 
TTCGCCAAGA TCGGCCTGCA CGTCTTCGAC AAGATGCTGG ACAATGGCTA CCGCAACATC 
ACGACGGCGG CAAAGCCCAT CGCCGGGCCC GACGACCTGA AGGGGCTCAA GATCCGCGTC 
CCGGGCAACC AGCTCTGGGT GACGATGTTC GACGCCCTCG GAGCCGCCCC GACGCCGATC 
AATTTCGGCG AGCTCTACGC GGCCCTGCAG ACGCACATCG TCGACGGGCA GGAGAACCCG 
CTCGCCCTGA TCTCCAGCGC CAAGCTCTAC GAGGTGCAGA AGCACATCGC GCTGACCGGC 
CACATCTGGG ACGGCCACCA CGTCTTCACC AATGCCCGCC GGTGGGCGGC GATGCCGGAG 
GCGATCCGGG CGAGCATCAC CAAGGGCCTG ACCGAGGCCG CCCTGAAGGA GCGCGAGGAC 
ATCCTGCGCC TCAACGAGGA GCTCATCGCC TCCATCACCA AGGCCGGCGT CACCTTCAGC 
AAGCCGGACA AGCAGCCCTT CCGCGAGGTG CTGAAGAAGG CCGGCTTCTA CGCCGACTGG 
AAGGGCCGAT TCGGCGCCGA GCCGTGGGCG CTCCTGGAGA AATACGCCGG CCCGCTCTGA
 
Protein sequence
MVTQGGISRR GVTAGLLAAG LIGGGALPVR AQRAKYRLRY GTAFPADHPG AVRIREAAEA 
IATATNGEVN LQVYPNSQLG GEADMFSQVR SGALDFMSTS GVNQTVLPVG GINAVAFAFD 
DYAKVWAAMD GDLGAYVRAQ FAKIGLHVFD KMLDNGYRNI TTAAKPIAGP DDLKGLKIRV 
PGNQLWVTMF DALGAAPTPI NFGELYAALQ THIVDGQENP LALISSAKLY EVQKHIALTG 
HIWDGHHVFT NARRWAAMPE AIRASITKGL TEAALKERED ILRLNEELIA SITKAGVTFS 
KPDKQPFREV LKKAGFYADW KGRFGAEPWA LLEKYAGPL