| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_0979 |
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| Symbol | |
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| ID | 7302522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011894 |
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| Strand | - |
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| Start bp | 1050454 |
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| End bp | 1052352 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643598732 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002496295 |
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| Protein GI | 220920994 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.383975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGCG AGATCTCCGA ATTCGGCAAG GCCGATAGCG CTGCGGACCA GGAGTCGAGG
CCCGTCCATC CCGGCACGCG CCTCTTCCAG GCCGTCGACA CGGGCCTTGC CCGGCTCACC
GAGGCGGCGG CCGCCCTCCT GGTGCTGGCC GAGGTGCTGC TGCTCGGCAC CAGCACGGCG
GCCCGCTACC TGTTCGCCCG CCCCTTCGCG TGGTCGGACG AGCTCGCCTC CATGCTGTTC
CTGTGGCTCG CCATGCTCGG CGCCGTGATC GCGCTGCGGC GCGGCGAGCA TATGCGGCTC
ACCGCCTTCG TCCGCGGCAT GCGGCCCGAG CACCGGGCCT GGCTCGATGC CCTCGCGCTG
ATGCTGGTCT CGGCGCTGCT GCTCGCGCTC GTGATGCCGA GCTTTGAGCA TTACGAGGAG
CGGGCCGTCG GCCTCACCCC CGTCCTGCAG ATCGGCGAGG GCTGGCGGAG CGGCGCGATG
CTGGTCGGCG CGGTGCTGAT GCTGTTCACC GCCGTCGACA CGCTCATCCG GCACGCGACC
TGGACGCAGA TCGGGCTCGC CCTGGTGGGG GTCGCGGCCG CCTTCGGGGC CCTCCTGTGG
CTGGCGCCGG TATTCGAGGA TCTCGGCAAT CTCAGCCTGC TCGTCTTCTT CCTGCTGTTC
GTCGTCGTCT CGATGGCGAC CGGCATGCCG ATCGCCTTCG CGTTCCTGAT CGGAACCGTG
AGCTACATCG CCTTCGCCAC CACGATCCCG CTTTCGATCG TGCCGAGCCG GATGGAGGAG
GGCATGAGCC ATCTCATCCT GCTCGCCGTG CCGCTCTTCG TGCTCCTCGG CGCCCTGATG
GAGATCTCGG GCCTCGCTCA GGGCATGATC GCGTTCCTGG TCTCGCTGAT CGGGCACCTG
CGCGGCGGGC TGCAATACGT GCTCCTCGGC GCGATGTACC TCGTCTCCGG CATCTCGGGC
GCGAAGGCGG CCGACATGGC GGCCGTGGCG CCGGCCCTGT TTCCGGAGAT GAGGAAGCGC
GGCAACCACG ACGGCGACCT CACCTCGCTC CTCTCGGCCT CCGCGGTGAT GTCGGAGACG
ATCCCGCCCT CGATCGTGCT GATCACGGTC GGCTCGGTCA CCGGCGTATC GATCGCGGCT
TTGTTCACCG GCGGCCTGAT GCCGGCCTTC GTGGGGATGC TGGCCCTCTG CGTCGTGGTC
TGGTGGCAGA GCCGCAGCGA GGATCTGTCC TCGGCGCGCC GCTTCACCTG GGGCGAGAAG
GGCCGGCTCC TGCTGATCGC GCTTCCGGGC CTCGGCCTGC CGGTGCTGAT CCGCACCGCC
GTCGTCGAGG GCGTGGCGAC CGCCACCGAG GTCTCGACCA TCGGCGTCCT CTACTCGGTC
CTAGTCGGGG TCCTGGTCTA CCGCCGGTTC GACTGGCGCC GGATCTACCC GATCCTGATC
GACACCGCCT CCCTGTCCGG CGCGATCCTG CTTGTGGTCG GGGCCGCCAC TGCGATGGCC
TGGGCGCTGA CCCAGTCCGG ATTCTCGCAG CAGCTCGTCG CGCTCATGGC GCTGGTGCCG
GGCGGCCAGG TCGGCTTCCT CCTCGTCTCG GCCCTCGCCT TCATCGTGCT GGGCAGCGTG
CTGGAGGGGG TGCCGGCGAT CGTGCTGTTC GGCCCCTTGC TTTTCCCGAT CGCCCGCCAG
ATGGGGGTCA ACGAGGTCCA CTACGCCATG ATCGCGGTCT TCGCGATGGG CTTCGGCCTG
TTCACTCCGC CCTTCGGGGT CGGCTTCTAT CTCGCCTGTG CCATCGGGCG CGTCTCGCCC
GACGTGGCGA TCAAGCGGGC CTGGCCGCAC TTGGCGGCGC TCCTCGTGGC GCTGATCCTC
ATCGTGCTGA TACCCTGGAT CTCGATCGGG TTCCTGTGA
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| Protein sequence | MQSEISEFGK ADSAADQESR PVHPGTRLFQ AVDTGLARLT EAAAALLVLA EVLLLGTSTA
ARYLFARPFA WSDELASMLF LWLAMLGAVI ALRRGEHMRL TAFVRGMRPE HRAWLDALAL
MLVSALLLAL VMPSFEHYEE RAVGLTPVLQ IGEGWRSGAM LVGAVLMLFT AVDTLIRHAT
WTQIGLALVG VAAAFGALLW LAPVFEDLGN LSLLVFFLLF VVVSMATGMP IAFAFLIGTV
SYIAFATTIP LSIVPSRMEE GMSHLILLAV PLFVLLGALM EISGLAQGMI AFLVSLIGHL
RGGLQYVLLG AMYLVSGISG AKAADMAAVA PALFPEMRKR GNHDGDLTSL LSASAVMSET
IPPSIVLITV GSVTGVSIAA LFTGGLMPAF VGMLALCVVV WWQSRSEDLS SARRFTWGEK
GRLLLIALPG LGLPVLIRTA VVEGVATATE VSTIGVLYSV LVGVLVYRRF DWRRIYPILI
DTASLSGAIL LVVGAATAMA WALTQSGFSQ QLVALMALVP GGQVGFLLVS ALAFIVLGSV
LEGVPAIVLF GPLLFPIARQ MGVNEVHYAM IAVFAMGFGL FTPPFGVGFY LACAIGRVSP
DVAIKRAWPH LAALLVALIL IVLIPWISIG FL
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