Gene Mnod_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0953 
Symbol 
ID7306191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp1021291 
End bp1022853 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content68% 
IMG OID643598706 
Product2-isopropylmalate synthase 
Protein accessionYP_002496269 
Protein GI220920968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGA CTGCCGCCTC CTCCGCCGAG CGCGTCCTGA TCTTCGACAC CACCTTGCGC 
GACGGCGAGC AGTGCCCCGG CGCCACCATG ACCTTCGAGG AGAAGCTCGC GGTGGCCGAG
ATGCTCGACG GCATGGGCGT CGACATCATC GAGGCGGGCT TCCCGATCGC CTCGAACGGC
GACTTCGACG CGGTGGCCGA GATCGCCCGG CGCACGAAAA CCTCGGTGGT CGCGGGTCTC
GCCCGGGCGA TTTCCGCCGA CATCGCCCGG GCCGGCGAGG CGGTGCGGCT GGCCAAGCGC
GGACGCATCC ACACCTTCGT GTCGACCTCG CCCATCCACC TCGCCCACCA GATGCGCAAG
AGCGAGGAGG AGGTTCTGGA GATCATCCAG AAGACCGTGG CCCAGGCCCG CGACCTCGTG
GAGGACGTGG AATGGTCGGC CATGGACGCG ACGCGCACGC CGATCGACTA TCTCTGCCGG
TGCGTCGAGA TGGCGATCAA GATGGGAGCG ACGACCATCA ACCTGCCGGA CACGGTGGGC
TACGCCACGC CCGACGAGTA CCGCGCGATG TTCCGCAGCG TGCGCGAGCG GGTGCCGAAC
GCCGACAGGG CGATCTTCTC GGTCCACTGC CACAACGACC TCGGGCTGGC GATCGCGAAC
TCGCTCGCCG GCATCGAGGG CGGGGCGCGT CAGGTCGAGT GCACCATCAA CGGCATCGGC
GAGCGGGCGG GGAACGCGGC GTTGGAGGAG GTGGTGATGG CGCTGCGCAC CCGCGCGGAC
GTACTGCCCT ACACGACCGG CATCGACACG ACGCAGATCA TGCGGGCCTC GAAGCTGGTC
GCCGCCGCGA CGCACTTCCC CGTGCAGTAC AACAAGGCGG TCGTCGGCCG GAACGCCTTC
GCGCATGAGA GCGGCATCCA CCAGGACGGG ATGCTCAAGA ATCAGTCCAC CTACGAGATC
ATGACGCCGG AATCGGTCGG CGTGCAGAAG ACCTCGCTGG TGATGGGCAA GCATTCGGGC
CGGGCGGCTT TCCGCTCGAA GCTGGAGGAA CTGGGATATC GCCTGTCCGA CAACCAGTTC
CAGGACGCGT TCGAGCGGTT CAAAGCGCTC GCCGACCGCA AGAAGAATGT CTACGACGAG
GATATCGAGG CGCTGGTCGA CGAGAACCTG GCGACCGCGC ACGACCGCAT CCGCCTTTTG
TCGCTGACTG TGATCGCCGG GACGCGGGGA CCGCAACGGG CGACGATGCG GCTCGATATC
GACGGGCGCC AAGCGACCGA GGAGGCGGAC GGCAACGGCC CGGTGGACGC GGTCTTCAAC
GCGATCCACG CCCTGGTGCC GCACGAGGCG AAGCTCGAAC TCTACGACGT GCATGCGGTC
ACGGAGGGCA CGGACGCGCA GGCCGAGGTC TCGGTGCGCC TGCGCCAGGG TGAGCGCAGC
GTGACGGCGC GGGGTGCCGA TCCGGACACG CTGGTCGCCT CGGCCAAGGC CTATCTCGCT
GCGCTCAACA AGCTCCTGGC TGGCGCGAAC CGCCTGCATG CCCAGCATGC GGCGGCCGAA
TAG
 
Protein sequence
MTETAASSAE RVLIFDTTLR DGEQCPGATM TFEEKLAVAE MLDGMGVDII EAGFPIASNG 
DFDAVAEIAR RTKTSVVAGL ARAISADIAR AGEAVRLAKR GRIHTFVSTS PIHLAHQMRK
SEEEVLEIIQ KTVAQARDLV EDVEWSAMDA TRTPIDYLCR CVEMAIKMGA TTINLPDTVG
YATPDEYRAM FRSVRERVPN ADRAIFSVHC HNDLGLAIAN SLAGIEGGAR QVECTINGIG
ERAGNAALEE VVMALRTRAD VLPYTTGIDT TQIMRASKLV AAATHFPVQY NKAVVGRNAF
AHESGIHQDG MLKNQSTYEI MTPESVGVQK TSLVMGKHSG RAAFRSKLEE LGYRLSDNQF
QDAFERFKAL ADRKKNVYDE DIEALVDENL ATAHDRIRLL SLTVIAGTRG PQRATMRLDI
DGRQATEEAD GNGPVDAVFN AIHALVPHEA KLELYDVHAV TEGTDAQAEV SVRLRQGERS
VTARGADPDT LVASAKAYLA ALNKLLAGAN RLHAQHAAAE