Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0800 |
Symbol | |
ID | 7306245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 878657 |
End bp | 880522 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643598569 |
Product | Hemolysin-type calcium-binding region |
Protein accession | YP_002496133 |
Protein GI | 220920832 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTTGT CGGACACGGA TTACTATGCG GCGCTGCGGG CCGCCAATCC CGACGTCGCG CCCATCCCGG GCATCGACGC GCCGGTGGGC TATATCGCGC GCGACACGCC GCCGCGATCG GCCGCCACGC TCGGCGCCGC CGACGGCGTC TACTACAACA AGGCGCTCAA CACCGTCGTG ATCTACCAAG CCGGCGTCAC CCTCGACAAC ATCGACTTCC GCGGCACCAC GGTCTTCGTT CAGGCAAACG ACGTCACCAT CAGGAACTCC CTGTTCGACG CCGCGGTCGG GGCGGCGGCG GTGGTGGGCT ACCCGGGCTA CGCGAACCTC ACCATCGACC ACTCCACCTT CGACGGGCTC AAGCTCGACA AGTACTACAA CGACTTCGTG GTGGCGCAGG GCCTCAACAC CACCCTCACC AACAACGCCT TCCTCAATGC GCCGAGCGAC GCGCTCTATC TCGAATCCGG GCGCGTGGCC GGCAACTACA TCGCGGGCGG CGGCTACCAG ACCGGGGCGC ATGCCGACGG GATCTGGATC GGCAAGTCCA CCGGCCCGAT CACGATCGAG GGCAACCTGC TCGACTGGCG CTCGGCGGCG GACGCCAAGG TGCAGACCAA CAATGCCCTG CGCATCACCG CCGAGAAGGG CGACGTCTCG AACGTGACGG TGCGCAACAA CGTGCTGCTC GGCGGCAGCT ACACGGTCTC GGTCACCGAC ACGGGGGCGG ATGCCGGCAA CGTCGCGGGC GTGAGTGTCA CGGGCAACGT CGTGGACGAG GGGCAGTGGG GCAACCTGTT CTTCAGCGAC CGGCCCGGCG ACCTCGTCTA TGCGGGCAAC CACGACAGGT TCGGGATCCC GCCGCGGGCG GGCACCGCCT CGACCGGTCC GACGCTCGCG GCCCTGACCG ACGGCACCAC CCGGCAGGTG GGCAGTGCCC AGAACGACGC GCTCCTGGGC AGCGCCGGGC GCGACTTCAT CCAGGGCGGC GACGGGCAGG ACTGGATCTC GGCCGGCGGC GGCGGCGACG TCATCGAGGG CGGCGCCGGG CGCGACTACC TGTATGGCGA TGCGGGAGCG GACAGCTTCC TGTACCGGGC CTGGACGGAC GGCCGCGACC TGATCAGCGA CTTCGTGCCT GGCGCGGACA AGATCCGGCT GGTCGACCTG CCGGGCGCGC CGCAGGAGGC GTCGTCCTGG ACCTGGCTCG GCGAGCGGCG CTTCGACGGC AACCCCTGGG AACTGCGCGC CGTGGCGACC GCGACCGGCA CCACGATGGT CGAGCTCGAC CGCGACGGCG ACATGACGGC GGATTTCGAG ATCGAGTTCT CGGGCCAGCA CAGTTTCACG GCGGCGGATT TCATCCTGGG GATCGGCACG GCGGCGGTGC CGGTGAACAC GCTGACGGGC ACCGACGGGG CGGATGTGCT GACGGGCAGC GCGCAGGCCG ACCTGATCCA GGGCGGCGCG GGCGGCGACT CGATCAAGGC CGGGGATGGC GACGACACGA TTCTCGGCGG CGCGGGCAAG GACATCATCG CGACGGGGGC CGGGCGCGAC CGCCTGGTTT ATGAGACGAT CACCGACAGC CTGCCGCAGA GCCGGGACTA CCTCACCGAT TTCACGCAGG GGCAGGATCA GCTGGATCTG GCGGCGATCG ATGCGGTCGA CGGCACGCCG GCGAACGAGG CCTTCACCTG GCTCGGCACG GGCGCGTTCG ATGGCCGGGC GGGGGAGTTG CGCTATGGCA CCACCGCGGC CGGCTCGACC CTGATCCAGG CGGACATCAC CGGGGACAAG GTCGCCGATT TCGCCGTGGA GCTCGCCGGC GCCATTCCGC TGAAACCCTC CGATTTCGTG CTCTAG
|
Protein sequence | MALSDTDYYA ALRAANPDVA PIPGIDAPVG YIARDTPPRS AATLGAADGV YYNKALNTVV IYQAGVTLDN IDFRGTTVFV QANDVTIRNS LFDAAVGAAA VVGYPGYANL TIDHSTFDGL KLDKYYNDFV VAQGLNTTLT NNAFLNAPSD ALYLESGRVA GNYIAGGGYQ TGAHADGIWI GKSTGPITIE GNLLDWRSAA DAKVQTNNAL RITAEKGDVS NVTVRNNVLL GGSYTVSVTD TGADAGNVAG VSVTGNVVDE GQWGNLFFSD RPGDLVYAGN HDRFGIPPRA GTASTGPTLA ALTDGTTRQV GSAQNDALLG SAGRDFIQGG DGQDWISAGG GGDVIEGGAG RDYLYGDAGA DSFLYRAWTD GRDLISDFVP GADKIRLVDL PGAPQEASSW TWLGERRFDG NPWELRAVAT ATGTTMVELD RDGDMTADFE IEFSGQHSFT AADFILGIGT AAVPVNTLTG TDGADVLTGS AQADLIQGGA GGDSIKAGDG DDTILGGAGK DIIATGAGRD RLVYETITDS LPQSRDYLTD FTQGQDQLDL AAIDAVDGTP ANEAFTWLGT GAFDGRAGEL RYGTTAAGST LIQADITGDK VADFAVELAG AIPLKPSDFV L
|
| |