Gene Mnod_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0786 
Symbol 
ID7306231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp857870 
End bp858469 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content71% 
IMG OID643598556 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002496120 
Protein GI220920819 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.348422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATG CGGCGGCCCG GTTCAACGAC GTGGTGCTGC CGCACCTCAA TGCGGCCTAC 
AATGTCGCGC GCTTCCTCTC CCGGGATCAG GACGCGGCCG AGGACATCGT CCAGGAGGCC
GTTCTGCGGG CGTTGCGGAG CTTCGACGGC TACCGGGGCG GCGACCCCCG CGCGTGGCTG
CTCGCCATCG TACGCAACTG CTTCCTGACC TGGGCGGCGA CGCGGATCGG AACGATTCCC
GCGGGTCGGG TGGATTGCCG GGACTGCGAG GCCGGGGACG AGCCCCGGAG CGACGAGCCT
CGGAGCGACC CTTGGGATCG CGAGCCGGCG ACGCCGGAAG CGGTGCTGCT TCGCGATGAC
GAGGCTGCCG CCGTGCGGCG CCTGATCGAG ATGCTGCCGG AGCCGTTCCG TGAGGCCCTC
GTCCTGCGCG AGATGGAGGA TCTCTCGTAC CGGCAGATCG CCGAGATCAC GGGCGTGCCC
CTCGGCACGG TGATGTCGCG CCTCGCCCGG GCACGCAGCC TGTTCGAGGC GTCGTGGCAG
CGGTGCTTCG GCGACGACGT CCCCCGGACT GATCCGCGAA GGGAGCGCGA GTTGCGATGA
 
Protein sequence
MSDAAARFND VVLPHLNAAY NVARFLSRDQ DAAEDIVQEA VLRALRSFDG YRGGDPRAWL 
LAIVRNCFLT WAATRIGTIP AGRVDCRDCE AGDEPRSDEP RSDPWDREPA TPEAVLLRDD
EAAAVRRLIE MLPEPFREAL VLREMEDLSY RQIAEITGVP LGTVMSRLAR ARSLFEASWQ
RCFGDDVPRT DPRRERELR