Gene Mnod_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_0486 
SymboldppF 
ID7302648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand- 
Start bp549204 
End bp550193 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content72% 
IMG OID643598265 
Productdipeptide transporter ATP-binding subunit 
Protein accessionYP_002495831 
Protein GI220920530 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGC CGGTCGTCGA GGCGAAGGAT CTCCGTCAGG TCTACGAGAT CCGCCGCGGG 
TTTTTTCGGG CACCGGCCCG GCTCCAGGCC GTGGGCGGCG TCTCCTTCGC GGTGCAGCCC 
GGGCGGACGC TCGCCGTCGT CGGCGAATCC GGCTGCGGCA AGTCCACCCT GGCCCGCATG 
GTGACGCTGA TCGAGCCGCC GACCGCCGGC TCCCTCACTC TCGACGGGAT CGACGCCGTC 
GATCCGCCGC GTGCCGATTG GCGGCGGCTG CGGCGCATGG TGCAGCTCGT GTTCCAGAAC 
CCTTATGGCT CCCTCAACCC GCGCCGGAAG GTCGGCGCCA TCCTGGAGGA GCCGCTCGCC 
ATCAACACCG ACCTGGCGCG GCCCGAGCGC ACCGCGCGGG CCCGCGCCAT GCTCGCCAAG 
GTCGGCCTGC GGCCCGAGCA TTACGACCGC TACCCGCACA TGTTCTCCGG CGGCCAGCGC 
CAGCGCATCG CCATCGCCCG CGCGCTGATG CTGAGCCCGA AGCTCGTGGT GGCGGACGAG 
CCGGTCTCGG CCCTCGACGT GTCGATCCAG GCGCAGGTGC TCAACCTGCT GGCCGATCTG 
CAGCAGGAGC TCGGCCTCGC CTACCTGTTC ATCTCGCACG ATCTCGGCGT CGTCCGGCAC 
ATCGCCCACG ACGTGCTGGT GATGTATCTC GGCCTCGTCA TGGAGCAGGG CGAGAAGGGG 
CGGATCTACG CCGCCCCGCT CCACCCCTAT ACCCAGGCGC TTCTCGGGGC GACGCCCGGC 
CTCACGGGGG CGAAGCGCAA GCGGATGGTA CTCGGTGGCG ACCTGCCCTC GCCCCTCTCG 
CCGCCGAAGG GCTGCGTCTT CTCGACCCGC TGCCCCTATG CGACCGATCT CTGCCGCGCC 
GAGCGTCCTG CGCTGCGCCC GCTCGACGGC CGGCTCGTCG CCTGCCACTA CGCCGAGACC 
TTCCTGGCCG AAGCGCCCGC CGCGGCCTGA
 
Protein sequence
MSAPVVEAKD LRQVYEIRRG FFRAPARLQA VGGVSFAVQP GRTLAVVGES GCGKSTLARM 
VTLIEPPTAG SLTLDGIDAV DPPRADWRRL RRMVQLVFQN PYGSLNPRRK VGAILEEPLA 
INTDLARPER TARARAMLAK VGLRPEHYDR YPHMFSGGQR QRIAIARALM LSPKLVVADE 
PVSALDVSIQ AQVLNLLADL QQELGLAYLF ISHDLGVVRH IAHDVLVMYL GLVMEQGEKG 
RIYAAPLHPY TQALLGATPG LTGAKRKRMV LGGDLPSPLS PPKGCVFSTR CPYATDLCRA 
ERPALRPLDG RLVACHYAET FLAEAPAAA