Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0406 |
Symbol | |
ID | 7302142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 453352 |
End bp | 455529 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643598185 |
Product | ABC transporter related |
Protein accession | YP_002495751 |
Protein GI | 220920450 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.330383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCTCG CCGGCCTCCT CCGCAGCCTC GGCGCCCGGG CGTCCGTCAA GGCGACCCCG ACCGTGCTGC AGATGGAGGC CGTCGAGTGT GGAGCGGCGG CCCTCGCCAT GGTCCTCGCC CATCACGGGG CCTGGGTGCC GCTCGAACAG CTGCGGATCG CCTGCGGGGT CTCCCGCGAC GGCAGCAAGG CCAGCAACAT CGTCAAGGCG GCGCGGCGCT TCGGCCTCGC CGCCAAGGGT TTTCGCAAAG AGCCCGCGAC CCTGCACGAG CTGCCGATGC CGTGCATCCT GCATTGGAAC TTCAACCACT TCGTGGTCCT CGAAGGCATC CGGGGGGATC ACGCCTTCAT CAACGACCCG GCCATGGGCC GCCGCCGCAT CACCATGACG GAGCTCGACC TCGCCTTCAC GGGCGTCGCC CTGGCGATGG AGCCGACGGA CGAGTTCCGC AGGCTCGGAC GCAAGCCGCA GGGCCTGCTG CTGCTGCTGC GGGAGCTGCG CTTCTCGCGC GCAGCCGTCG GCCTCGTGGT CGGCGTGAGC CTTGCGCTGA TCGTTCCTGG CATCCTCATC CCGGGCTTCA CCAAGGTCTT CGTCGACGAG GTGCTGATCC AGAACTCGAA GGGCTGGCTC GTGCCGCTCC TCATCGGCAT GGGGCTCACC GCCCTGTTCC GGGCCGGCGT GACGGCGCTG CAGCTCTCGC TGACCCTGCG GCTGCAGACC AAGCTCGCGG TGGTGATGAC GAGCCGATTC CTGTGGCACG TCCTGGCACT GCCGATGGAG TTCTTCGCCC AGCGCCACGC GGGCGACATC GCCAACCGGG TCGCCACCAA CGAAGAGATC GCCCGCCTGC TCTCGGGCGG CGTGGTGAGC AACGCGCTCA GCCTCACCTC GCTGGTGTTC TTCGCCGCCG CCATGGCGGT CTACGACGGG CTGCTTGCCG CGATCGGCGT GACCCTCTCG CTCCTCAACG TCCTGGCGCT GCGGCTGATC GCGGGGCGCC GAGAGGATCT GAGCCGCAGC CTCGCCCTCG AACGCGGCAA GCTCCTCGGC AGCACGATCA GCGCGGTGCG CACCATCGAG ACCCTCAAGG CGAGCGGCCT GGAGGACGAG GCCTTCGCCC AGTGGGCGGG GATCCAGGCC AAGGCCCTCA ACGCCGAGCA GGAACTCGGC GCGGCCTCGA CCCTGCTCGA GGCGGTCCCG ACCCTCATCT CCGGGCTGAC CCTCGCGGCG ATCCTCGGCA TCGGCGGCCT GAGGGTGATC GAGGGCTCGT TGACCCTCGG CGGCCTCGTG GCCTTCCAGT CCCTGATGGC GAGCTTCTCC GAGCCGATCA CCGCGCTCGT CAACCAGATC GGCAGCATCC AGACCATCAA GGGCGGTCTG GAGCGGCTGG AGGACGTCTA CAACTATCCG GTGGACCACC CGGCACCGGA GCCGGAATCC GAGCCGCTGC CGCCCAAGCT CGTCGGCCGC GTGGAGCTGC GGGACGTCTC CTTCGGCTAC GCGATCCTGG AGCCGCCGCT GCTTGCGGAT CTCTCGATCA CCATCGAGCC CGGCACCCGG CTTGCCCTGG TCGGCCTGTC GGGCAGCGGG AAATCCACCC TCGGGCGCCT GATCTGCGGC CTGCTCAAGC CCTGGTCGGG CGAGGTGCGG ATCGACGGCC GCCGGCTCGA TGCCATCCCG CCGGAGGTCT TCGCGAATTC GGTGGCCTAT GTCGACCAGG ACGTCGTCCT GTTCGAGGGC ACGGCGCGGG ACAATCTCAC CCTGTGGGAT CCCACCGTGG CGGAGCCCGA CCTGTCCCTC GCCCTCAAGG ACGCGGCGAT CCACGGGGAG ATCGCGACGC GGCCGGGCAA CTACGATTGC CGGGTGGTGG AGGGCGGCAC CAATTTCAGC GGCGGCCAGC GTCAGCGCAT CGAGATCGCC CGTGCCCTCG TCGCGAACCC GTCGGTGATC GTGCTCGACG AGGCGACCGC CGCCCTCGAC CCGGTGACCG AGAAGGCCAT CGACGACAAC CTGCGGCGGC GGGGCTGCAC CTGCATCATC ATCGCCCACC GCCTGAGCAC GATCCGGGAT TGCGACGAGA TCATCGTGCT GGAGCAGGGC CGGATCGTCG AGCGGGGGAC GCACGAGCAG CTCATCGCCC GCGCGGGCGC CTACGCCCAT CTGGTGGCCC AGCAATGA
|
Protein sequence | MRLAGLLRSL GARASVKATP TVLQMEAVEC GAAALAMVLA HHGAWVPLEQ LRIACGVSRD GSKASNIVKA ARRFGLAAKG FRKEPATLHE LPMPCILHWN FNHFVVLEGI RGDHAFINDP AMGRRRITMT ELDLAFTGVA LAMEPTDEFR RLGRKPQGLL LLLRELRFSR AAVGLVVGVS LALIVPGILI PGFTKVFVDE VLIQNSKGWL VPLLIGMGLT ALFRAGVTAL QLSLTLRLQT KLAVVMTSRF LWHVLALPME FFAQRHAGDI ANRVATNEEI ARLLSGGVVS NALSLTSLVF FAAAMAVYDG LLAAIGVTLS LLNVLALRLI AGRREDLSRS LALERGKLLG STISAVRTIE TLKASGLEDE AFAQWAGIQA KALNAEQELG AASTLLEAVP TLISGLTLAA ILGIGGLRVI EGSLTLGGLV AFQSLMASFS EPITALVNQI GSIQTIKGGL ERLEDVYNYP VDHPAPEPES EPLPPKLVGR VELRDVSFGY AILEPPLLAD LSITIEPGTR LALVGLSGSG KSTLGRLICG LLKPWSGEVR IDGRRLDAIP PEVFANSVAY VDQDVVLFEG TARDNLTLWD PTVAEPDLSL ALKDAAIHGE IATRPGNYDC RVVEGGTNFS GGQRQRIEIA RALVANPSVI VLDEATAALD PVTEKAIDDN LRRRGCTCII IAHRLSTIRD CDEIIVLEQG RIVERGTHEQ LIARAGAYAH LVAQQ
|
| |