Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_0405 |
Symbol | |
ID | 7302141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011894 |
Strand | + |
Start bp | 452077 |
End bp | 453345 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643598184 |
Product | membrane-fusion protein |
Protein accession | YP_002495750 |
Protein GI | 220920449 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.390525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCAT CCCCGCAGCG GACCTTCCGG GCGATTTCGC TGGAACGTGC CTCGTCGCCC GAACAGCTCG ATCATCTTGT CCGCATCACC AAGCCCGCCG ACTGGATCCT GGGCGCGGTC ATCGCCCTTC TGCTCACGAC GGCCCTGACC TGGAGCGTCG TCGGGCGTAT CCCGACCCGC GCGGCGGGCG AGGGCATTCT CGTGAGCGTG GGCGGGCGAG TGGTCGATGC GGTCTCGGCC ACGGCAGGCC GCCTCGCGAC GATCGAGGTC GCGGTCGGCG ACCGCGTCGC ACAGGGCCAG ACGGTCGCCC GCATCGCCCA GACCGAGATC GAGCAGCGCT ACCGCAACGC CGTGGAGGTC CACCGCGAGC GTGAGCGCGA GCACACCACG CTCAAGGCCA AGACCGAGAG CGAGCTCGCC GCCAAGGCAC GCAACTTCGC CAAGCTGGAG GAGGCCTTCA CCCAGATCGT CCAGGCCACG GAGCAGCGCA TCGACTATCT GGCCGGCGAG GTGAAGAACC TGGAGATGCT GCTCTCCAAG GGCATCACCA CCCGCCGGAT CGTCGAGGAC CGGCGGCGCG AGCTCACCGA CGCGCGCCAG CGCCGCCAGG ACGCCCAGAA CGAGGTGCTC AAGCTGCGCT CGCAGAAGGC CGACCTCGAA ACCCAGCGCG AGCGCGACAT CCAAGATTCG GAGTTCCGCC TCAACGAGGC GCGCCGCCAG ATGGAGCAGC TTGCCGGCGA ACTCGGGCGC AACACGCAGG TGACGAGCCC GATCGAGGGA CGCGTCCTCG AGATCAAGGT CTCGCCGGGC TCGGTCCTCT CCGTCGGCAC GCCGGTGATC GCGGTCGAGA CCGAGGGCAA GGCGCTGGAG GCCGTGATCT ACATCCCGGC CGACAAGGGC AAGGCCGTGA AGCCCGGCAT GGAGACCCGC CTCGAGCCGA GCACGGTCAA GCGGGAGGAG TTCGGAACCC TCGTCGGGAC GGTGGTGTCG ATCTCCGACT TCCCGATCAC GCCACAGGGC ATGGCCGCGG TGCTGCACAA CGACAGCCTA GTCACCCGCT TCTCGCAGGA GGGGGCGCCC TACGCCGCTC TCGTGCGCCT CCAGCCGGAT CCGGGCACAG CGAGCGGCTA CCGCTGGGCG GTCGGCAAGG GGCCGGACCT GCGGCTCACC AGCGGCACGC TCACCAAGGC CGAGATCACC ACCCGCGAGC AGCGCCCCCT CGATCTCGTG GTGCCGATGC TCAAGCGCCT GACCGGCCTC GCCGGGTAG
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Protein sequence | MSPSPQRTFR AISLERASSP EQLDHLVRIT KPADWILGAV IALLLTTALT WSVVGRIPTR AAGEGILVSV GGRVVDAVSA TAGRLATIEV AVGDRVAQGQ TVARIAQTEI EQRYRNAVEV HREREREHTT LKAKTESELA AKARNFAKLE EAFTQIVQAT EQRIDYLAGE VKNLEMLLSK GITTRRIVED RRRELTDARQ RRQDAQNEVL KLRSQKADLE TQRERDIQDS EFRLNEARRQ MEQLAGELGR NTQVTSPIEG RVLEIKVSPG SVLSVGTPVI AVETEGKALE AVIYIPADKG KAVKPGMETR LEPSTVKREE FGTLVGTVVS ISDFPITPQG MAAVLHNDSL VTRFSQEGAP YAALVRLQPD PGTASGYRWA VGKGPDLRLT SGTLTKAEIT TREQRPLDLV VPMLKRLTGL AG
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